Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXG1P55316 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXG1P55316 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXG1P55316 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXG1P55316 NOC2LP2-201ENST00000407594 1944 ntBASIC15.51■□□□□ 0.07
FOXG1P55316 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXG1P55316 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXG1P55316 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
FOXG1P55316 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FOXG1P55316 AL049757.1-201ENST00000616842 1596 ntBASIC15.51■□□□□ 0.07
FOXG1P55316 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FOXG1P55316 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXG1P55316 TPM4P1-201ENST00000436100 807 ntBASIC15.51■□□□□ 0.07
FOXG1P55316 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
FOXG1P55316 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 TP73-AS1-207ENST00000624167 988 ntBASIC15.51■□□□□ 0.07
FOXG1P55316 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXG1P55316 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
FOXG1P55316 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
FOXG1P55316 AP005117.1-201ENST00000584346 1413 ntBASIC15.51■□□□□ 0.07
FOXG1P55316 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXG1P55316 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXG1P55316 AL355312.1-201ENST00000407115 2176 ntBASIC15.51■□□□□ 0.07
FOXG1P55316 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXG1P55316 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
FOXG1P55316 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
FOXG1P55316 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXG1P55316 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXG1P55316 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXG1P55316 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
FOXG1P55316 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
FOXG1P55316 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXG1P55316 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 AC109462.3-201ENST00000573934 613 ntBASIC15.5■□□□□ 0.07
FOXG1P55316 MTDHP3-201ENST00000594186 672 ntBASIC15.5■□□□□ 0.07
FOXG1P55316 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXG1P55316 AC008608.2-201ENST00000606089 416 ntBASIC15.5■□□□□ 0.07
FOXG1P55316 AD001527.2-201ENST00000622994 785 ntBASIC15.5■□□□□ 0.07
FOXG1P55316 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXG1P55316 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXG1P55316 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
FOXG1P55316 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXG1P55316 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXG1P55316 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
FOXG1P55316 SLC25A6P5-201ENST00000435663 894 ntBASIC15.49■□□□□ 0.07
FOXG1P55316 FGFR3P6-201ENST00000457012 610 ntBASIC15.49■□□□□ 0.07
FOXG1P55316 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXG1P55316 AC009078.2-202ENST00000463353 338 ntBASIC15.49■□□□□ 0.07
FOXG1P55316 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXG1P55316 AC106795.1-205ENST00000512851 1056 ntBASIC15.49■□□□□ 0.07
FOXG1P55316 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
FOXG1P55316 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
FOXG1P55316 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXG1P55316 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXG1P55316 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXG1P55316 AP000867.4-201ENST00000641616 219 ntBASIC15.49■□□□□ 0.07
FOXG1P55316 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
FOXG1P55316 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.49■□□□□ 0.07
FOXG1P55316 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXG1P55316 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
FOXG1P55316 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
FOXG1P55316 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXG1P55316 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
FOXG1P55316 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms