Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NR1H2P55055 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.84■□□□□ 0.29
NR1H2P55055 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NR1H2P55055 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NR1H2P55055 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NR1H2P55055 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NR1H2P55055 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 TERF1P1-201ENST00000311003 1181 ntBASIC16.83■□□□□ 0.28
NR1H2P55055 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
NR1H2P55055 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.83■□□□□ 0.28
NR1H2P55055 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.83■□□□□ 0.28
NR1H2P55055 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
NR1H2P55055 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.83■□□□□ 0.28
NR1H2P55055 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.83■□□□□ 0.28
NR1H2P55055 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.83■□□□□ 0.28
NR1H2P55055 ATP5G1P1-201ENST00000448724 379 ntBASIC16.83■□□□□ 0.28
NR1H2P55055 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 RCC2P6-201ENST00000526625 1557 ntBASIC16.83■□□□□ 0.28
NR1H2P55055 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.83■□□□□ 0.28
NR1H2P55055 SLC25A1P4-201ENST00000567977 778 ntBASIC16.83■□□□□ 0.28
NR1H2P55055 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NR1H2P55055 AC008741.2-201ENST00000612792 3115 ntBASIC16.83■□□□□ 0.28
NR1H2P55055 AC130371.2-201ENST00000619443 611 ntBASIC16.83■□□□□ 0.28
NR1H2P55055 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NR1H2P55055 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H2P55055 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.83■□□□□ 0.28
NR1H2P55055 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
NR1H2P55055 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NR1H2P55055 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.82■□□□□ 0.28
NR1H2P55055 KRT18P57-201ENST00000443599 1254 ntBASIC16.82■□□□□ 0.28
NR1H2P55055 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.82■□□□□ 0.28
NR1H2P55055 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.82■□□□□ 0.28
NR1H2P55055 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.82■□□□□ 0.28
NR1H2P55055 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 LINC02199-201ENST00000506655 2702 ntBASIC16.82■□□□□ 0.28
NR1H2P55055 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H2P55055 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NR1H2P55055 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.81■□□□□ 0.28
NR1H2P55055 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NR1H2P55055 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NR1H2P55055 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NR1H2P55055 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NR1H2P55055 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NR1H2P55055 FAM207BP-201ENST00000447172 505 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms