Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.93■□□□□ 0.62
RAD23BP54727 AC007967.3-201ENST00000434308 558 ntBASIC18.93■□□□□ 0.62
RAD23BP54727 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.93■□□□□ 0.62
RAD23BP54727 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.93■□□□□ 0.62
RAD23BP54727 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.93■□□□□ 0.62
RAD23BP54727 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.93■□□□□ 0.62
RAD23BP54727 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.93■□□□□ 0.62
RAD23BP54727 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.93■□□□□ 0.62
RAD23BP54727 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.93■□□□□ 0.62
RAD23BP54727 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
RAD23BP54727 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.93■□□□□ 0.62
RAD23BP54727 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAD23BP54727 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.92■□□□□ 0.62
RAD23BP54727 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RAD23BP54727 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.92■□□□□ 0.62
RAD23BP54727 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.92■□□□□ 0.62
RAD23BP54727 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.92■□□□□ 0.62
RAD23BP54727 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.92■□□□□ 0.62
RAD23BP54727 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RAD23BP54727 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RAD23BP54727 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.92■□□□□ 0.62
RAD23BP54727 AC104819.1-201ENST00000504587 486 ntBASIC18.92■□□□□ 0.62
RAD23BP54727 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.92■□□□□ 0.62
RAD23BP54727 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 BNIP3P18-201ENST00000593976 575 ntBASIC18.92■□□□□ 0.62
RAD23BP54727 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.92■□□□□ 0.62
RAD23BP54727 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.92■□□□□ 0.62
RAD23BP54727 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAD23BP54727 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
RAD23BP54727 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.92■□□□□ 0.62
RAD23BP54727 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAD23BP54727 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
RAD23BP54727 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.91■□□□□ 0.62
RAD23BP54727 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.91■□□□□ 0.62
RAD23BP54727 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.91■□□□□ 0.62
RAD23BP54727 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.91■□□□□ 0.62
RAD23BP54727 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.91■□□□□ 0.62
RAD23BP54727 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RAD23BP54727 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RAD23BP54727 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RAD23BP54727 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 MINOS1P3-201ENST00000457048 203 ntBASIC18.91■□□□□ 0.62
RAD23BP54727 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.91■□□□□ 0.62
RAD23BP54727 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RAD23BP54727 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.91■□□□□ 0.62
RAD23BP54727 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.91■□□□□ 0.62
RAD23BP54727 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.91■□□□□ 0.62
RAD23BP54727 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RAD23BP54727 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAD23BP54727 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.91■□□□□ 0.62
RAD23BP54727 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RAD23BP54727 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RAD23BP54727 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.9■□□□□ 0.62
RAD23BP54727 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RAD23BP54727 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RAD23BP54727 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.9■□□□□ 0.62
RAD23BP54727 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 AC009533.2-201ENST00000543664 586 ntBASIC18.9■□□□□ 0.62
RAD23BP54727 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.9■□□□□ 0.62
RAD23BP54727 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.9■□□□□ 0.62
RAD23BP54727 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms