Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDR1P51861 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR1P51861 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDR1P51861 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDR1P51861 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR1P51861 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR1P51861 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDR1P51861 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDR1P51861 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CDR1P51861 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDR1P51861 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 GPR32P1-201ENST00000601788 811 ntBASIC19.39■□□□□ 0.69
CDR1P51861 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.39■□□□□ 0.69
CDR1P51861 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDR1P51861 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.39■□□□□ 0.69
CDR1P51861 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
CDR1P51861 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.39■□□□□ 0.69
CDR1P51861 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDR1P51861 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.39■□□□□ 0.69
CDR1P51861 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.39■□□□□ 0.69
CDR1P51861 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDR1P51861 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.39■□□□□ 0.69
CDR1P51861 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDR1P51861 AL024508.2-201ENST00000607749 1894 ntBASIC19.39■□□□□ 0.69
CDR1P51861 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.39■□□□□ 0.69
CDR1P51861 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.39■□□□□ 0.69
CDR1P51861 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 MIR149-201ENST00000384879 89 ntBASIC19.38■□□□□ 0.69
CDR1P51861 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.38■□□□□ 0.69
CDR1P51861 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.38■□□□□ 0.69
CDR1P51861 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.38■□□□□ 0.69
CDR1P51861 UNC93B7-201ENST00000509439 705 ntBASIC19.38■□□□□ 0.69
CDR1P51861 KRT18P41-201ENST00000518924 1277 ntBASIC19.38■□□□□ 0.69
CDR1P51861 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDR1P51861 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.38■□□□□ 0.69
CDR1P51861 PRELID1P1-202ENST00000567272 903 ntBASIC19.38■□□□□ 0.69
CDR1P51861 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.38■□□□□ 0.69
CDR1P51861 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.38■□□□□ 0.69
CDR1P51861 AL732292.2-201ENST00000609649 430 ntBASIC19.38■□□□□ 0.69
CDR1P51861 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.38■□□□□ 0.69
CDR1P51861 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR1P51861 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.37■□□□□ 0.69
CDR1P51861 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDR1P51861 AL353692.3-201ENST00000407031 1396 ntBASIC19.37■□□□□ 0.69
CDR1P51861 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.37■□□□□ 0.69
CDR1P51861 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CDR1P51861 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
CDR1P51861 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
CDR1P51861 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.37■□□□□ 0.69
CDR1P51861 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDR1P51861 AL450487.1-201ENST00000426799 995 ntBASIC19.37■□□□□ 0.69
CDR1P51861 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.37■□□□□ 0.69
CDR1P51861 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.37■□□□□ 0.69
CDR1P51861 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.37■□□□□ 0.69
CDR1P51861 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.37■□□□□ 0.69
CDR1P51861 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 AC067852.2-201ENST00000590513 2313 ntBASIC19.37■□□□□ 0.69
CDR1P51861 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDR1P51861 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CDR1P51861 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR1P51861 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
CDR1P51861 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.36■□□□□ 0.69
CDR1P51861 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms