Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1P51610 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1P51610 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 MRPL20P1-201ENST00000400819 433 ntBASIC15.36■□□□□ 0.05
HCFC1P51610 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC1P51610 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1P51610 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.36■□□□□ 0.05
HCFC1P51610 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC1P51610 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC1P51610 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC1P51610 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
HCFC1P51610 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1P51610 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC1P51610 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HCFC1P51610 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.35■□□□□ 0.05
HCFC1P51610 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.35■□□□□ 0.05
HCFC1P51610 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.35■□□□□ 0.05
HCFC1P51610 MIR4751-201ENST00000578027 74 ntBASIC15.35■□□□□ 0.05
HCFC1P51610 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1P51610 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.35■□□□□ 0.05
HCFC1P51610 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC1P51610 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HCFC1P51610 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC1P51610 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 GPR89P-201ENST00000407924 1495 ntBASIC15.35■□□□□ 0.05
HCFC1P51610 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HCFC1P51610 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1P51610 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1P51610 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 AL020989.1-201ENST00000422979 469 ntBASIC15.34■□□□□ 0.05
HCFC1P51610 AL645939.2-201ENST00000427340 991 ntBASIC15.34■□□□□ 0.05
HCFC1P51610 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.34■□□□□ 0.05
HCFC1P51610 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.34■□□□□ 0.05
HCFC1P51610 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.34■□□□□ 0.05
HCFC1P51610 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.34■□□□□ 0.05
HCFC1P51610 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 PHGDH-209ENST00000641074 1780 ntBASIC15.34■□□□□ 0.05
HCFC1P51610 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HCFC1P51610 ADH5P3-201ENST00000433842 1137 ntBASIC15.34■□□□□ 0.05
HCFC1P51610 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 RPS15P9-201ENST00000494093 319 ntBASIC15.34■□□□□ 0.05
HCFC1P51610 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 AL805961.1-202ENST00000641562 540 ntBASIC15.34■□□□□ 0.05
HCFC1P51610 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.34■□□□□ 0.05
HCFC1P51610 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1P51610 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HCFC1P51610 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms