Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.63■□□□□ 0.73
BRCA2P51587 AC069335.1-201ENST00000489972 472 ntBASIC19.63■□□□□ 0.73
BRCA2P51587 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BRCA2P51587 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
BRCA2P51587 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
BRCA2P51587 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.63■□□□□ 0.73
BRCA2P51587 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BRCA2P51587 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.63■□□□□ 0.73
BRCA2P51587 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.63■□□□□ 0.73
BRCA2P51587 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.63■□□□□ 0.73
BRCA2P51587 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.62■□□□□ 0.73
BRCA2P51587 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.62■□□□□ 0.73
BRCA2P51587 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.62■□□□□ 0.73
BRCA2P51587 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 AL353135.1-201ENST00000606729 504 ntBASIC19.62■□□□□ 0.73
BRCA2P51587 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.62■□□□□ 0.73
BRCA2P51587 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
BRCA2P51587 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.62■□□□□ 0.73
BRCA2P51587 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCA2P51587 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
BRCA2P51587 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.61■□□□□ 0.73
BRCA2P51587 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.61■□□□□ 0.73
BRCA2P51587 AL390754.1-201ENST00000619088 582 ntBASIC19.61■□□□□ 0.73
BRCA2P51587 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.61■□□□□ 0.73
BRCA2P51587 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.61■□□□□ 0.73
BRCA2P51587 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BRCA2P51587 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.61■□□□□ 0.73
BRCA2P51587 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.61■□□□□ 0.73
BRCA2P51587 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BRCA2P51587 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.61■□□□□ 0.73
BRCA2P51587 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.61■□□□□ 0.73
BRCA2P51587 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCA2P51587 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.6■□□□□ 0.73
BRCA2P51587 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
BRCA2P51587 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCA2P51587 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
BRCA2P51587 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCA2P51587 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCA2P51587 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCA2P51587 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.6■□□□□ 0.73
BRCA2P51587 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BRCA2P51587 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BRCA2P51587 PHGDH-209ENST00000641074 1780 ntBASIC19.6■□□□□ 0.73
BRCA2P51587 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 TREML5P-201ENST00000421694 576 ntBASIC19.6■□□□□ 0.73
BRCA2P51587 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.6■□□□□ 0.73
BRCA2P51587 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.6■□□□□ 0.73
BRCA2P51587 AL135744.1-201ENST00000565098 629 ntBASIC19.6■□□□□ 0.73
BRCA2P51587 AP001059.3-201ENST00000619053 235 ntBASIC19.6■□□□□ 0.73
BRCA2P51587 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BRCA2P51587 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
BRCA2P51587 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.6■□□□□ 0.73
BRCA2P51587 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 PIN1P1-201ENST00000412108 996 ntBASIC19.6■□□□□ 0.73
BRCA2P51587 RN7SL692P-201ENST00000464677 288 ntBASIC19.6■□□□□ 0.73
BRCA2P51587 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.6■□□□□ 0.73
BRCA2P51587 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCA2P51587 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BRCA2P51587 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
BRCA2P51587 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
BRCA2P51587 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms