Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB28P51157 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 AC005104.2-201ENST00000427818 678 ntBASIC17.09■□□□□ 0.33
RAB28P51157 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB28P51157 AC132008.2-207ENST00000454517 770 ntBASIC17.09■□□□□ 0.33
RAB28P51157 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.09■□□□□ 0.33
RAB28P51157 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.09■□□□□ 0.33
RAB28P51157 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB28P51157 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB28P51157 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAB28P51157 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 SIRPAP1-201ENST00000448467 1770 ntBASIC17.09■□□□□ 0.33
RAB28P51157 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB28P51157 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB28P51157 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB28P51157 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAB28P51157 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB28P51157 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RAB28P51157 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB28P51157 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
RAB28P51157 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB28P51157 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB28P51157 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.33
RAB28P51157 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RAB28P51157 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RAB28P51157 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RAB28P51157 REXO1L11P-201ENST00000620964 1927 ntBASIC17.08■□□□□ 0.33
RAB28P51157 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB28P51157 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB28P51157 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB28P51157 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB28P51157 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB28P51157 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB28P51157 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB28P51157 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.08■□□□□ 0.32
RAB28P51157 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB28P51157 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB28P51157 AC002558.1-201ENST00000488906 803 ntBASIC17.08■□□□□ 0.32
RAB28P51157 UNC93B7-201ENST00000509439 705 ntBASIC17.08■□□□□ 0.32
RAB28P51157 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RAB28P51157 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB28P51157 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB28P51157 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB28P51157 REXO1L6P-202ENST00000619970 1078 ntBASIC17.08■□□□□ 0.32
RAB28P51157 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB28P51157 GNAS-203ENST00000306120 1878 ntBASIC17.07■□□□□ 0.32
RAB28P51157 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB28P51157 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB28P51157 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB28P51157 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB28P51157 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB28P51157 ABCD1P5-201ENST00000445663 754 ntBASIC17.07■□□□□ 0.32
RAB28P51157 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB28P51157 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB28P51157 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 AC019129.2-201ENST00000609837 1235 ntBASIC17.07■□□□□ 0.32
RAB28P51157 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAB28P51157 AD001527.2-201ENST00000622994 785 ntBASIC17.07■□□□□ 0.32
RAB28P51157 LINC01451-201ENST00000623792 534 ntBASIC17.07■□□□□ 0.32
RAB28P51157 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB28P51157 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB28P51157 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB28P51157 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB28P51157 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB28P51157 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms