Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC9A3P48764 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC9A3P48764 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC9A3P48764 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC9A3P48764 AL596257.1-201ENST00000641463 2694 ntBASIC16.28■□□□□ 0.2
SLC9A3P48764 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 LINC00167-201ENST00000530583 1419 ntBASIC16.28■□□□□ 0.2
SLC9A3P48764 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC9A3P48764 AC100803.2-201ENST00000562459 1963 ntBASIC16.27■□□□□ 0.2
SLC9A3P48764 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SLC9A3P48764 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 LINC01568-207ENST00000641790 1380 ntBASIC16.27■□□□□ 0.2
SLC9A3P48764 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
SLC9A3P48764 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 KRT18P22-201ENST00000402024 1347 ntBASIC16.27■□□□□ 0.2
SLC9A3P48764 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC9A3P48764 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC9A3P48764 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC9A3P48764 AC034232.1-201ENST00000506026 1064 ntBASIC16.27■□□□□ 0.2
SLC9A3P48764 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC9A3P48764 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC9A3P48764 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC9A3P48764 AC116407.2-201ENST00000613639 860 ntBASIC16.27■□□□□ 0.2
SLC9A3P48764 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC9A3P48764 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
SLC9A3P48764 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC9A3P48764 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
SLC9A3P48764 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC9A3P48764 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC9A3P48764 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC9A3P48764 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 AP001094.4-201ENST00000579008 2176 ntBASIC16.26■□□□□ 0.19
SLC9A3P48764 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SLC9A3P48764 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC9A3P48764 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC9A3P48764 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC9A3P48764 AL157888.1-201ENST00000631930 593 ntBASIC16.26■□□□□ 0.19
SLC9A3P48764 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SLC9A3P48764 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC9A3P48764 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC9A3P48764 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC9A3P48764 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC9A3P48764 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC9A3P48764 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC9A3P48764 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC9A3P48764 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC9A3P48764 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC9A3P48764 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC9A3P48764 KRT89P-201ENST00000620027 1478 ntBASIC16.25■□□□□ 0.19
SLC9A3P48764 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC9A3P48764 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
SLC9A3P48764 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms