Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC026471.1-201ENST00000564629 3026 ntBASIC18.47■□□□□ 0.55
MTHFRP42898 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.47■□□□□ 0.55
MTHFRP42898 AC006504.4-201ENST00000592118 1568 ntBASIC18.47■□□□□ 0.55
MTHFRP42898 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MTHFRP42898 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
MTHFRP42898 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
MTHFRP42898 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
MTHFRP42898 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.47■□□□□ 0.55
MTHFRP42898 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.47■□□□□ 0.55
MTHFRP42898 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.47■□□□□ 0.55
MTHFRP42898 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.47■□□□□ 0.55
MTHFRP42898 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.47■□□□□ 0.55
MTHFRP42898 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.47■□□□□ 0.55
MTHFRP42898 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.47■□□□□ 0.55
MTHFRP42898 AC018845.2-201ENST00000568326 409 ntBASIC18.47■□□□□ 0.55
MTHFRP42898 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.47■□□□□ 0.55
MTHFRP42898 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.47■□□□□ 0.55
MTHFRP42898 AC008667.4-201ENST00000607370 168 ntBASIC18.47■□□□□ 0.55
MTHFRP42898 AL513190.1-201ENST00000621254 727 ntBASIC18.47■□□□□ 0.55
MTHFRP42898 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MTHFRP42898 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
MTHFRP42898 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
MTHFRP42898 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 NCF1C-201ENST00000438382 1427 ntBASIC18.47■□□□□ 0.55
MTHFRP42898 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.47■□□□□ 0.55
MTHFRP42898 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
MTHFRP42898 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.47■□□□□ 0.55
MTHFRP42898 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MTHFRP42898 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.47■□□□□ 0.55
MTHFRP42898 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
MTHFRP42898 AL138781.2-201ENST00000617896 1843 ntBASIC18.46■□□□□ 0.55
MTHFRP42898 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.46■□□□□ 0.55
MTHFRP42898 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.46■□□□□ 0.55
MTHFRP42898 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
MTHFRP42898 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.46■□□□□ 0.55
MTHFRP42898 FAM8A3P-201ENST00000427218 844 ntBASIC18.46■□□□□ 0.55
MTHFRP42898 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.46■□□□□ 0.55
MTHFRP42898 CEND1P1-201ENST00000451006 455 ntBASIC18.46■□□□□ 0.55
MTHFRP42898 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.46■□□□□ 0.55
MTHFRP42898 IGHV3-65-201ENST00000523210 341 ntBASIC18.46■□□□□ 0.55
MTHFRP42898 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.46■□□□□ 0.55
MTHFRP42898 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.46■□□□□ 0.55
MTHFRP42898 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.46■□□□□ 0.55
MTHFRP42898 AL078644.1-201ENST00000609881 752 ntBASIC18.46■□□□□ 0.55
MTHFRP42898 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 AC132938.6-201ENST00000623828 1655 ntBASIC18.46■□□□□ 0.55
MTHFRP42898 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.46■□□□□ 0.55
MTHFRP42898 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MTHFRP42898 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.45■□□□□ 0.54
MTHFRP42898 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.45■□□□□ 0.54
MTHFRP42898 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.45■□□□□ 0.54
MTHFRP42898 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.45■□□□□ 0.54
MTHFRP42898 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.45■□□□□ 0.54
MTHFRP42898 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 COX5BP2-201ENST00000392354 334 ntBASIC18.45■□□□□ 0.54
MTHFRP42898 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.45■□□□□ 0.54
MTHFRP42898 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.45■□□□□ 0.54
MTHFRP42898 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.45■□□□□ 0.54
MTHFRP42898 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.45■□□□□ 0.54
MTHFRP42898 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.45■□□□□ 0.54
MTHFRP42898 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MTHFRP42898 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.44■□□□□ 0.54
MTHFRP42898 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MTHFRP42898 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MTHFRP42898 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MTHFRP42898 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms