Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
USP8P40818 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
USP8P40818 TMPOP1-202ENST00000424642 1267 ntBASIC19.32■□□□□ 0.68
USP8P40818 HLA-F-220ENST00000434407 884 ntBASIC19.32■□□□□ 0.68
USP8P40818 KRT18P21-201ENST00000515767 1272 ntBASIC19.32■□□□□ 0.68
USP8P40818 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.32■□□□□ 0.68
USP8P40818 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.32■□□□□ 0.68
USP8P40818 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
USP8P40818 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.32■□□□□ 0.68
USP8P40818 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
USP8P40818 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.32■□□□□ 0.68
USP8P40818 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP8P40818 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.31■□□□□ 0.68
USP8P40818 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
USP8P40818 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 AC022898.2-201ENST00000616822 1312 ntBASIC19.31■□□□□ 0.68
USP8P40818 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.31■□□□□ 0.68
USP8P40818 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.31■□□□□ 0.68
USP8P40818 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.31■□□□□ 0.68
USP8P40818 DUTP2-201ENST00000519164 463 ntBASIC19.31■□□□□ 0.68
USP8P40818 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.31■□□□□ 0.68
USP8P40818 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.31■□□□□ 0.68
USP8P40818 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.31■□□□□ 0.68
USP8P40818 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
USP8P40818 AC004263.2-201ENST00000617183 678 ntBASIC19.31■□□□□ 0.68
USP8P40818 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.31■□□□□ 0.68
USP8P40818 AL356309.3-201ENST00000624132 1934 ntBASIC19.31■□□□□ 0.68
USP8P40818 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
USP8P40818 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP8P40818 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.3■□□□□ 0.68
USP8P40818 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
USP8P40818 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.3■□□□□ 0.68
USP8P40818 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.3■□□□□ 0.68
USP8P40818 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.3■□□□□ 0.68
USP8P40818 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.3■□□□□ 0.68
USP8P40818 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP8P40818 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.3■□□□□ 0.68
USP8P40818 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.3■□□□□ 0.68
USP8P40818 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.3■□□□□ 0.68
USP8P40818 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.3■□□□□ 0.68
USP8P40818 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.3■□□□□ 0.68
USP8P40818 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.3■□□□□ 0.68
USP8P40818 AC113404.2-201ENST00000507884 177 ntBASIC19.3■□□□□ 0.68
USP8P40818 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.3■□□□□ 0.68
USP8P40818 LINC01311-201ENST00000565162 1445 ntBASIC19.3■□□□□ 0.68
USP8P40818 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.3■□□□□ 0.68
USP8P40818 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 NFIC-211ENST00000641145 8399 ntBASIC19.3■□□□□ 0.68
USP8P40818 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.3■□□□□ 0.68
USP8P40818 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
USP8P40818 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.3■□□□□ 0.68
USP8P40818 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
USP8P40818 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP8P40818 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP8P40818 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP8P40818 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
USP8P40818 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP8P40818 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP8P40818 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.29■□□□□ 0.68
USP8P40818 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.29■□□□□ 0.68
USP8P40818 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP8P40818 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
USP8P40818 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP8P40818 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
USP8P40818 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP8P40818 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP8P40818 HBZP1-201ENST00000354915 429 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms