Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.06□□□□□ -0.32
CKS2P33552 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.06□□□□□ -0.32
CKS2P33552 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.06□□□□□ -0.32
CKS2P33552 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.06□□□□□ -0.32
CKS2P33552 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 HLA-J-201ENST00000462773 1622 ntBASIC13.06□□□□□ -0.32
CKS2P33552 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS2P33552 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CKS2P33552 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CKS2P33552 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.05□□□□□ -0.32
CKS2P33552 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 AL050303.2-201ENST00000619798 666 ntBASIC13.05□□□□□ -0.32
CKS2P33552 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CKS2P33552 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS2P33552 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CKS2P33552 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS2P33552 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS2P33552 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS2P33552 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS2P33552 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS2P33552 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS2P33552 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CKS2P33552 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CKS2P33552 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.04□□□□□ -0.32
CKS2P33552 FLJ38576-201ENST00000623820 2459 ntBASIC13.04□□□□□ -0.32
CKS2P33552 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.04□□□□□ -0.32
CKS2P33552 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.04□□□□□ -0.32
CKS2P33552 MCCD1P1-208ENST00000445732 328 ntBASIC13.04□□□□□ -0.32
CKS2P33552 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CKS2P33552 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.04□□□□□ -0.32
CKS2P33552 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CKS2P33552 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.04□□□□□ -0.32
CKS2P33552 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms