Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.79■□□□□ 0.44
LSP1P33241 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 LYSMD4-203ENST00000378904 2122 ntBASIC17.79■□□□□ 0.44
LSP1P33241 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.79■□□□□ 0.44
LSP1P33241 NCF1B-203ENST00000435988 1254 ntBASIC17.79■□□□□ 0.44
LSP1P33241 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.79■□□□□ 0.44
LSP1P33241 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
LSP1P33241 CKBP1-201ENST00000565489 1086 ntBASIC17.79■□□□□ 0.44
LSP1P33241 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.79■□□□□ 0.44
LSP1P33241 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.79■□□□□ 0.44
LSP1P33241 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.79■□□□□ 0.44
LSP1P33241 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.79■□□□□ 0.44
LSP1P33241 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LSP1P33241 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LSP1P33241 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LSP1P33241 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LSP1P33241 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LSP1P33241 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LSP1P33241 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 AC046185.3-201ENST00000623228 1824 ntBASIC17.79■□□□□ 0.44
LSP1P33241 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSP1P33241 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LSP1P33241 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LSP1P33241 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 AC024909.3-201ENST00000611513 2257 ntBASIC17.78■□□□□ 0.44
LSP1P33241 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LSP1P33241 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 MIPEPP3-201ENST00000412105 444 ntBASIC17.78■□□□□ 0.44
LSP1P33241 MCCD1P1-208ENST00000445732 328 ntBASIC17.78■□□□□ 0.44
LSP1P33241 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.78■□□□□ 0.44
LSP1P33241 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.78■□□□□ 0.44
LSP1P33241 PRKY-204ENST00000533551 1019 ntBASIC17.78■□□□□ 0.44
LSP1P33241 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 SOX15-203ENST00000570788 1093 ntBASIC17.78■□□□□ 0.44
LSP1P33241 AC060766.5-201ENST00000590539 871 ntBASIC17.78■□□□□ 0.44
LSP1P33241 AL109923.1-201ENST00000618799 583 ntBASIC17.78■□□□□ 0.44
LSP1P33241 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSP1P33241 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.78■□□□□ 0.44
LSP1P33241 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.77■□□□□ 0.44
LSP1P33241 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LSP1P33241 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
LSP1P33241 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.77■□□□□ 0.44
LSP1P33241 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LSP1P33241 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 ID1-201ENST00000376105 1233 ntBASIC17.77■□□□□ 0.44
LSP1P33241 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.77■□□□□ 0.44
LSP1P33241 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 AL050303.2-201ENST00000619798 666 ntBASIC17.77■□□□□ 0.44
LSP1P33241 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.77■□□□□ 0.44
LSP1P33241 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSP1P33241 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LSP1P33241 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LSP1P33241 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.77■□□□□ 0.44
LSP1P33241 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
LSP1P33241 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSP1P33241 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSP1P33241 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
LSP1P33241 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
LSP1P33241 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSP1P33241 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms