Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC069335.1-201ENST00000489972 472 ntBASIC19.79■□□□□ 0.76
CTGFP29279 MEIS3P1-201ENST00000495167 958 ntBASIC19.79■□□□□ 0.76
CTGFP29279 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.79■□□□□ 0.76
CTGFP29279 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTGFP29279 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTGFP29279 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTGFP29279 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTGFP29279 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTGFP29279 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTGFP29279 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.79■□□□□ 0.76
CTGFP29279 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.78■□□□□ 0.76
CTGFP29279 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
CTGFP29279 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.78■□□□□ 0.76
CTGFP29279 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CTGFP29279 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
CTGFP29279 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.78■□□□□ 0.76
CTGFP29279 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.78■□□□□ 0.76
CTGFP29279 BASP1P1-201ENST00000430708 665 ntBASIC19.78■□□□□ 0.76
CTGFP29279 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.78■□□□□ 0.76
CTGFP29279 SLC25A6P2-201ENST00000497974 877 ntBASIC19.78■□□□□ 0.76
CTGFP29279 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTGFP29279 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTGFP29279 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
CTGFP29279 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CTGFP29279 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.78■□□□□ 0.76
CTGFP29279 TUBB3P1-201ENST00000405796 1332 ntBASIC19.77■□□□□ 0.76
CTGFP29279 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.77■□□□□ 0.76
CTGFP29279 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.77■□□□□ 0.76
CTGFP29279 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 AL592309.1-201ENST00000443127 649 ntBASIC19.77■□□□□ 0.76
CTGFP29279 CNN2P2-201ENST00000443536 909 ntBASIC19.77■□□□□ 0.76
CTGFP29279 CNN2P3-201ENST00000450201 906 ntBASIC19.77■□□□□ 0.76
CTGFP29279 AC079140.1-201ENST00000508039 487 ntBASIC19.77■□□□□ 0.76
CTGFP29279 AP005018.1-201ENST00000525475 301 ntBASIC19.77■□□□□ 0.76
CTGFP29279 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.77■□□□□ 0.76
CTGFP29279 AL512356.2-201ENST00000546955 174 ntBASIC19.77■□□□□ 0.76
CTGFP29279 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 AC243562.1-201ENST00000560672 389 ntBASIC19.77■□□□□ 0.76
CTGFP29279 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.77■□□□□ 0.76
CTGFP29279 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.77■□□□□ 0.76
CTGFP29279 AL136317.3-201ENST00000618497 906 ntBASIC19.77■□□□□ 0.76
CTGFP29279 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CTGFP29279 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CTGFP29279 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTGFP29279 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.77■□□□□ 0.76
CTGFP29279 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CTGFP29279 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CTGFP29279 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.76■□□□□ 0.75
CTGFP29279 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CTGFP29279 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.76■□□□□ 0.75
CTGFP29279 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CTGFP29279 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CTGFP29279 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.76■□□□□ 0.75
CTGFP29279 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTGFP29279 AC002056.1-201ENST00000395613 760 ntBASIC19.76■□□□□ 0.75
CTGFP29279 SPDYE11-202ENST00000450699 704 ntBASIC19.76■□□□□ 0.75
CTGFP29279 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTGFP29279 IGHV3-52-201ENST00000519770 353 ntBASIC19.76■□□□□ 0.75
CTGFP29279 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.76■□□□□ 0.75
CTGFP29279 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.76■□□□□ 0.75
CTGFP29279 SPDYE9P-201ENST00000570642 692 ntBASIC19.76■□□□□ 0.75
CTGFP29279 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.76■□□□□ 0.75
CTGFP29279 SPDYE10P-202ENST00000612005 668 ntBASIC19.76■□□□□ 0.75
CTGFP29279 SPDYE8P-202ENST00000612377 668 ntBASIC19.76■□□□□ 0.75
CTGFP29279 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.76■□□□□ 0.75
CTGFP29279 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTGFP29279 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
CTGFP29279 AL096828.2-201ENST00000567259 1965 ntBASIC19.75■□□□□ 0.75
CTGFP29279 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTGFP29279 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms