Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AP000347.1-202ENST00000435868 847 ntBASIC15.25■□□□□ 0.03
CD40P25942 HNRNPDP1-201ENST00000439535 754 ntBASIC15.25■□□□□ 0.03
CD40P25942 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.25■□□□□ 0.03
CD40P25942 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.25■□□□□ 0.03
CD40P25942 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.25■□□□□ 0.03
CD40P25942 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 AC073592.5-201ENST00000624854 528 ntBASIC15.25■□□□□ 0.03
CD40P25942 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CD40P25942 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 AL049757.1-201ENST00000616842 1596 ntBASIC15.24■□□□□ 0.03
CD40P25942 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 BICD1-207ENST00000551848 1962 ntBASIC15.24■□□□□ 0.03
CD40P25942 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.24■□□□□ 0.03
CD40P25942 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.24■□□□□ 0.03
CD40P25942 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.24■□□□□ 0.03
CD40P25942 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.24■□□□□ 0.03
CD40P25942 MTDHP4-201ENST00000600287 670 ntBASIC15.24■□□□□ 0.03
CD40P25942 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.24■□□□□ 0.03
CD40P25942 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CD40P25942 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.24■□□□□ 0.03
CD40P25942 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.24■□□□□ 0.03
CD40P25942 AL353593.2-201ENST00000602529 1483 ntBASIC15.24■□□□□ 0.03
CD40P25942 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.24■□□□□ 0.03
CD40P25942 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CD40P25942 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD40P25942 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 IL9RP2-201ENST00000423948 1312 ntBASIC15.23■□□□□ 0.03
CD40P25942 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.23■□□□□ 0.03
CD40P25942 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 SPDYE21P-201ENST00000413323 827 ntBASIC15.23■□□□□ 0.03
CD40P25942 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.23■□□□□ 0.03
CD40P25942 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 BX005266.1-201ENST00000473402 457 ntBASIC15.23■□□□□ 0.03
CD40P25942 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 OR7E14P-202ENST00000530490 1290 ntBASIC15.23■□□□□ 0.03
CD40P25942 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.23■□□□□ 0.03
CD40P25942 AC139887.3-201ENST00000568585 713 ntBASIC15.23■□□□□ 0.03
CD40P25942 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.23■□□□□ 0.03
CD40P25942 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
CD40P25942 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 AL049840.3-201ENST00000602669 611 ntBASIC15.23■□□□□ 0.03
CD40P25942 AC025062.2-201ENST00000605477 670 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms