Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
MMP8P22894 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MMP8P22894 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP8P22894 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MMP8P22894 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.6■□□□□ 0.57
MMP8P22894 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.6■□□□□ 0.57
MMP8P22894 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.6■□□□□ 0.57
MMP8P22894 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
MMP8P22894 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 MIR1224-201ENST00000408193 85 ntBASIC18.6■□□□□ 0.57
MMP8P22894 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP8P22894 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP8P22894 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP8P22894 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.6■□□□□ 0.57
MMP8P22894 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.6■□□□□ 0.57
MMP8P22894 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.6■□□□□ 0.57
MMP8P22894 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 NPAP1P7-201ENST00000613027 823 ntBASIC18.6■□□□□ 0.57
MMP8P22894 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.6■□□□□ 0.57
MMP8P22894 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.6■□□□□ 0.57
MMP8P22894 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP8P22894 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MMP8P22894 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP8P22894 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP8P22894 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
MMP8P22894 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP8P22894 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.6■□□□□ 0.57
MMP8P22894 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP8P22894 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP8P22894 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 ARMC10P1-201ENST00000313754 855 ntBASIC18.59■□□□□ 0.57
MMP8P22894 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.59■□□□□ 0.57
MMP8P22894 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
MMP8P22894 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.59■□□□□ 0.57
MMP8P22894 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.59■□□□□ 0.57
MMP8P22894 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP8P22894 AC009533.2-201ENST00000543664 586 ntBASIC18.59■□□□□ 0.57
MMP8P22894 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP8P22894 MIR3180-1-201ENST00000580374 94 ntBASIC18.59■□□□□ 0.57
MMP8P22894 MIR3180-3-201ENST00000584616 94 ntBASIC18.59■□□□□ 0.57
MMP8P22894 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MMP8P22894 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP8P22894 AC091076.1-201ENST00000610741 619 ntBASIC18.59■□□□□ 0.57
MMP8P22894 AL139327.4-201ENST00000612362 153 ntBASIC18.59■□□□□ 0.57
MMP8P22894 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP8P22894 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP8P22894 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MMP8P22894 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP8P22894 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MMP8P22894 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP8P22894 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MMP8P22894 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP8P22894 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP8P22894 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MMP8P22894 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.58■□□□□ 0.57
MMP8P22894 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
MMP8P22894 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP8P22894 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MMP8P22894 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MMP8P22894 FAM220CP-201ENST00000395253 831 ntBASIC18.58■□□□□ 0.56
MMP8P22894 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.58■□□□□ 0.56
MMP8P22894 TOB2P1-201ENST00000469761 992 ntBASIC18.58■□□□□ 0.56
MMP8P22894 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP8P22894 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.58■□□□□ 0.56
MMP8P22894 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP8P22894 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
MMP8P22894 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MMP8P22894 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP8P22894 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
MMP8P22894 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MMP8P22894 AL049757.1-201ENST00000616842 1596 ntBASIC18.58■□□□□ 0.56
MMP8P22894 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP8P22894 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms