Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN3P20807 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.06■□□□□ 0.32
CAPN3P20807 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CAPN3P20807 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.06■□□□□ 0.32
CAPN3P20807 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CAPN3P20807 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 HMGA1P5-201ENST00000412453 271 ntBASIC17.06■□□□□ 0.32
CAPN3P20807 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CAPN3P20807 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.06■□□□□ 0.32
CAPN3P20807 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.06■□□□□ 0.32
CAPN3P20807 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.06■□□□□ 0.32
CAPN3P20807 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN3P20807 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.06■□□□□ 0.32
CAPN3P20807 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN3P20807 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.06■□□□□ 0.32
CAPN3P20807 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.06■□□□□ 0.32
CAPN3P20807 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CAPN3P20807 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CAPN3P20807 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CAPN3P20807 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CAPN3P20807 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN3P20807 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CAPN3P20807 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.06■□□□□ 0.32
CAPN3P20807 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.06■□□□□ 0.32
CAPN3P20807 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CAPN3P20807 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN3P20807 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN3P20807 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CAPN3P20807 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.05■□□□□ 0.32
CAPN3P20807 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN3P20807 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.05■□□□□ 0.32
CAPN3P20807 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.05■□□□□ 0.32
CAPN3P20807 AL691432.3-201ENST00000621860 400 ntBASIC17.05■□□□□ 0.32
CAPN3P20807 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN3P20807 AL118508.1-201ENST00000613502 2345 ntBASIC17.05■□□□□ 0.32
CAPN3P20807 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN3P20807 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CAPN3P20807 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CAPN3P20807 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPN3P20807 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CAPN3P20807 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CAPN3P20807 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN3P20807 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CAPN3P20807 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 AC092647.4-201ENST00000457211 535 ntBASIC17.04■□□□□ 0.32
CAPN3P20807 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 LINC01451-201ENST00000623792 534 ntBASIC17.04■□□□□ 0.32
CAPN3P20807 AL121956.5-201ENST00000625261 221 ntBASIC17.04■□□□□ 0.32
CAPN3P20807 AC116562.4-202ENST00000641738 218 ntBASIC17.04■□□□□ 0.32
CAPN3P20807 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CAPN3P20807 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN3P20807 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
CAPN3P20807 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CAPN3P20807 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN3P20807 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN3P20807 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN3P20807 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN3P20807 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CAPN3P20807 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CAPN3P20807 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
CAPN3P20807 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CAPN3P20807 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms