Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
KRT4P19013 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT4P19013 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KRT4P19013 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
KRT4P19013 AC060834.1-201ENST00000443027 2032 ntBASIC17.78■□□□□ 0.44
KRT4P19013 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT4P19013 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT4P19013 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 SEC1P-202ENST00000473944 940 ntBASIC17.78■□□□□ 0.44
KRT4P19013 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT4P19013 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
KRT4P19013 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT4P19013 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT4P19013 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT4P19013 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT4P19013 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
KRT4P19013 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT4P19013 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT4P19013 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT4P19013 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT4P19013 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
KRT4P19013 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KRT4P19013 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KRT4P19013 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
KRT4P19013 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT4P19013 AC007663.1-201ENST00000438948 1240 ntBASIC17.77■□□□□ 0.44
KRT4P19013 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT4P19013 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.77■□□□□ 0.44
KRT4P19013 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.77■□□□□ 0.44
KRT4P19013 AC026471.5-201ENST00000615068 467 ntBASIC17.77■□□□□ 0.44
KRT4P19013 AL049637.2-201ENST00000641778 930 ntBASIC17.77■□□□□ 0.44
KRT4P19013 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
KRT4P19013 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT4P19013 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT4P19013 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT4P19013 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT4P19013 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT4P19013 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT4P19013 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT4P19013 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT4P19013 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT4P19013 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT4P19013 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
KRT4P19013 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT4P19013 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
KRT4P19013 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT4P19013 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
KRT4P19013 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
KRT4P19013 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.76■□□□□ 0.43
KRT4P19013 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT4P19013 AC012618.2-201ENST00000428058 849 ntBASIC17.76■□□□□ 0.43
KRT4P19013 DDX43P3-201ENST00000441064 443 ntBASIC17.76■□□□□ 0.43
KRT4P19013 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT4P19013 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.76■□□□□ 0.43
KRT4P19013 AC233702.5-201ENST00000584107 538 ntBASIC17.76■□□□□ 0.43
KRT4P19013 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.76■□□□□ 0.43
KRT4P19013 AC116562.4-202ENST00000641738 218 ntBASIC17.76■□□□□ 0.43
KRT4P19013 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
KRT4P19013 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms