Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS1P17812 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CTPS1P17812 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.8■□□□□ 0.44
CTPS1P17812 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 TSPY19P-201ENST00000418461 509 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 SLC25A6P5-201ENST00000435663 894 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 DDX43P3-201ENST00000441064 443 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 TSPY18P-201ENST00000441642 509 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.8■□□□□ 0.44
CTPS1P17812 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 KRT18P31-201ENST00000506277 1292 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 AC091304.2-201ENST00000564639 760 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.8■□□□□ 0.44
CTPS1P17812 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 MIR5100-201ENST00000579544 119 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.8■□□□□ 0.44
CTPS1P17812 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.8■□□□□ 0.44
CTPS1P17812 AC011467.2-201ENST00000598425 242 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CTPS1P17812 SIRPAP1-201ENST00000448467 1770 ntBASIC17.8■□□□□ 0.44
CTPS1P17812 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CTPS1P17812 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTPS1P17812 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CTPS1P17812 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CTPS1P17812 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.79■□□□□ 0.44
CTPS1P17812 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.79■□□□□ 0.44
CTPS1P17812 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.79■□□□□ 0.44
CTPS1P17812 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.79■□□□□ 0.44
CTPS1P17812 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CTPS1P17812 AL591684.3-201ENST00000605187 298 ntBASIC17.79■□□□□ 0.44
CTPS1P17812 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTPS1P17812 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.79■□□□□ 0.44
CTPS1P17812 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.79■□□□□ 0.44
CTPS1P17812 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CTPS1P17812 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTPS1P17812 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
CTPS1P17812 INTS4P1-201ENST00000438455 1935 ntBASIC17.78■□□□□ 0.44
CTPS1P17812 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.78■□□□□ 0.44
CTPS1P17812 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.78■□□□□ 0.44
CTPS1P17812 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.78■□□□□ 0.44
CTPS1P17812 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.78■□□□□ 0.44
CTPS1P17812 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 COX5BP2-201ENST00000392354 334 ntBASIC17.78■□□□□ 0.44
CTPS1P17812 FAM220CP-201ENST00000395253 831 ntBASIC17.78■□□□□ 0.44
CTPS1P17812 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.78■□□□□ 0.44
CTPS1P17812 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.78■□□□□ 0.44
CTPS1P17812 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.78■□□□□ 0.44
CTPS1P17812 KRT16P4-201ENST00000453883 522 ntBASIC17.78■□□□□ 0.44
CTPS1P17812 UNC93B7-201ENST00000509439 705 ntBASIC17.78■□□□□ 0.44
CTPS1P17812 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.78■□□□□ 0.44
CTPS1P17812 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.78■□□□□ 0.44
CTPS1P17812 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTPS1P17812 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.78■□□□□ 0.44
CTPS1P17812 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CTPS1P17812 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.78■□□□□ 0.44
CTPS1P17812 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTPS1P17812 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms