Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL11A1P12107 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.95■□□□□ 0.78
COL11A1P12107 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A1P12107 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A1P12107 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A1P12107 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.95■□□□□ 0.78
COL11A1P12107 AC087289.5-201ENST00000586076 3175 ntBASIC19.95■□□□□ 0.78
COL11A1P12107 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL11A1P12107 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.95■□□□□ 0.78
COL11A1P12107 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.95■□□□□ 0.78
COL11A1P12107 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
COL11A1P12107 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A1P12107 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A1P12107 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL11A1P12107 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.95■□□□□ 0.78
COL11A1P12107 LINC00982-205ENST00000420957 435 ntBASIC19.95■□□□□ 0.78
COL11A1P12107 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.95■□□□□ 0.78
COL11A1P12107 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
COL11A1P12107 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.95■□□□□ 0.78
COL11A1P12107 AL355385.1-201ENST00000606123 409 ntBASIC19.95■□□□□ 0.78
COL11A1P12107 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A1P12107 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A1P12107 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.94■□□□□ 0.78
COL11A1P12107 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A1P12107 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.94■□□□□ 0.78
COL11A1P12107 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
COL11A1P12107 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.94■□□□□ 0.78
COL11A1P12107 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A1P12107 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.94■□□□□ 0.78
COL11A1P12107 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A1P12107 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
COL11A1P12107 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.93■□□□□ 0.78
COL11A1P12107 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL11A1P12107 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.93■□□□□ 0.78
COL11A1P12107 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL11A1P12107 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.93■□□□□ 0.78
COL11A1P12107 VN2R19P-201ENST00000442399 1052 ntBASIC19.93■□□□□ 0.78
COL11A1P12107 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL11A1P12107 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.93■□□□□ 0.78
COL11A1P12107 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.93■□□□□ 0.78
COL11A1P12107 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
COL11A1P12107 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
COL11A1P12107 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 AL135999.2-201ENST00000622438 1686 ntBASIC19.93■□□□□ 0.78
COL11A1P12107 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A1P12107 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.92■□□□□ 0.78
COL11A1P12107 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.92■□□□□ 0.78
COL11A1P12107 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL11A1P12107 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.92■□□□□ 0.78
COL11A1P12107 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.92■□□□□ 0.78
COL11A1P12107 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
COL11A1P12107 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.92■□□□□ 0.78
COL11A1P12107 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.92■□□□□ 0.78
COL11A1P12107 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL11A1P12107 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 TSEN15P1-201ENST00000423257 515 ntBASIC19.92■□□□□ 0.78
COL11A1P12107 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.92■□□□□ 0.78
COL11A1P12107 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 PRSS29P-201ENST00000440800 595 ntBASIC19.92■□□□□ 0.78
COL11A1P12107 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.92■□□□□ 0.78
COL11A1P12107 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.92■□□□□ 0.78
COL11A1P12107 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.92■□□□□ 0.78
COL11A1P12107 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms