Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 AC096633.1-201ENST00000422446 749 ntBASIC18.66■□□□□ 0.58
KRT3P12035 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT3P12035 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT3P12035 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT3P12035 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
KRT3P12035 LINC01451-201ENST00000623792 534 ntBASIC18.66■□□□□ 0.58
KRT3P12035 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KRT3P12035 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 AC097374.2-201ENST00000618617 1306 ntBASIC18.66■□□□□ 0.58
KRT3P12035 HLA-J-201ENST00000462773 1622 ntBASIC18.66■□□□□ 0.58
KRT3P12035 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT3P12035 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT3P12035 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
KRT3P12035 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT3P12035 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT3P12035 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
KRT3P12035 AC011840.4-201ENST00000578471 627 ntBASIC18.65■□□□□ 0.58
KRT3P12035 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.65■□□□□ 0.58
KRT3P12035 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT3P12035 AL353801.3-201ENST00000609898 542 ntBASIC18.65■□□□□ 0.58
KRT3P12035 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 AC016734.2-201ENST00000624325 1377 ntBASIC18.65■□□□□ 0.58
KRT3P12035 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT3P12035 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
KRT3P12035 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT3P12035 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT3P12035 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.64■□□□□ 0.58
KRT3P12035 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KRT3P12035 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KRT3P12035 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KRT3P12035 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
KRT3P12035 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRT3P12035 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT3P12035 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT3P12035 CHCHD2P8-201ENST00000429873 447 ntBASIC18.64■□□□□ 0.57
KRT3P12035 KRT18P35-201ENST00000510488 1269 ntBASIC18.64■□□□□ 0.57
KRT3P12035 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT3P12035 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRT3P12035 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT3P12035 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT3P12035 IER3-202ENST00000376377 1350 ntBASIC18.64■□□□□ 0.57
KRT3P12035 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT3P12035 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT3P12035 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KRT3P12035 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRT3P12035 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT3P12035 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT3P12035 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KRT3P12035 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT3P12035 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT3P12035 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT3P12035 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT3P12035 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT3P12035 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms