Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.42■□□□□ 0.22
UBL4AP11441 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.42■□□□□ 0.22
UBL4AP11441 AL136038.3-201ENST00000561909 1096 ntBASIC16.42■□□□□ 0.22
UBL4AP11441 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 AL121956.5-201ENST00000625261 221 ntBASIC16.42■□□□□ 0.22
UBL4AP11441 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
UBL4AP11441 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.42■□□□□ 0.22
UBL4AP11441 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
UBL4AP11441 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.42■□□□□ 0.22
UBL4AP11441 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBL4AP11441 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
UBL4AP11441 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.41■□□□□ 0.22
UBL4AP11441 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBL4AP11441 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.41■□□□□ 0.22
UBL4AP11441 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.41■□□□□ 0.22
UBL4AP11441 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
UBL4AP11441 AL031133.1-201ENST00000406807 723 ntBASIC16.41■□□□□ 0.22
UBL4AP11441 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.41■□□□□ 0.22
UBL4AP11441 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.41■□□□□ 0.22
UBL4AP11441 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.41■□□□□ 0.22
UBL4AP11441 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.41■□□□□ 0.22
UBL4AP11441 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
UBL4AP11441 AC006116.8-202ENST00000587620 1550 ntBASIC16.41■□□□□ 0.22
UBL4AP11441 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBL4AP11441 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.41■□□□□ 0.22
UBL4AP11441 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBL4AP11441 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
UBL4AP11441 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.4■□□□□ 0.22
UBL4AP11441 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
UBL4AP11441 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
UBL4AP11441 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.4■□□□□ 0.22
UBL4AP11441 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.4■□□□□ 0.22
UBL4AP11441 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 AC112698.1-201ENST00000510299 916 ntBASIC16.4■□□□□ 0.22
UBL4AP11441 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
UBL4AP11441 AC087388.1-201ENST00000571370 1112 ntBASIC16.4■□□□□ 0.22
UBL4AP11441 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.4■□□□□ 0.22
UBL4AP11441 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.4■□□□□ 0.22
UBL4AP11441 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBL4AP11441 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.4■□□□□ 0.22
UBL4AP11441 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.4■□□□□ 0.22
UBL4AP11441 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.4■□□□□ 0.22
UBL4AP11441 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBL4AP11441 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
UBL4AP11441 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
UBL4AP11441 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBL4AP11441 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBL4AP11441 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBL4AP11441 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms