Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLTAP09496 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLTAP09496 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.37■□□□□ 0.69
CLTAP09496 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.37■□□□□ 0.69
CLTAP09496 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.37■□□□□ 0.69
CLTAP09496 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLTAP09496 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.37■□□□□ 0.69
CLTAP09496 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLTAP09496 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.37■□□□□ 0.69
CLTAP09496 AL591684.3-201ENST00000605187 298 ntBASIC19.37■□□□□ 0.69
CLTAP09496 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.37■□□□□ 0.69
CLTAP09496 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.37■□□□□ 0.69
CLTAP09496 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.37■□□□□ 0.69
CLTAP09496 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLTAP09496 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.37■□□□□ 0.69
CLTAP09496 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLTAP09496 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.37■□□□□ 0.69
CLTAP09496 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.36■□□□□ 0.69
CLTAP09496 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.36■□□□□ 0.69
CLTAP09496 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 NOC2LP2-201ENST00000407594 1944 ntBASIC19.36■□□□□ 0.69
CLTAP09496 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.36■□□□□ 0.69
CLTAP09496 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.36■□□□□ 0.69
CLTAP09496 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.36■□□□□ 0.69
CLTAP09496 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 AC116407.2-201ENST00000613639 860 ntBASIC19.36■□□□□ 0.69
CLTAP09496 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.36■□□□□ 0.69
CLTAP09496 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLTAP09496 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 AC068880.1-201ENST00000507289 2297 ntBASIC19.36■□□□□ 0.69
CLTAP09496 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLTAP09496 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLTAP09496 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.35■□□□□ 0.69
CLTAP09496 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.35■□□□□ 0.69
CLTAP09496 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.35■□□□□ 0.69
CLTAP09496 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.35■□□□□ 0.69
CLTAP09496 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.35■□□□□ 0.69
CLTAP09496 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CLTAP09496 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.35■□□□□ 0.69
CLTAP09496 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.35■□□□□ 0.69
CLTAP09496 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.35■□□□□ 0.69
CLTAP09496 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.35■□□□□ 0.69
CLTAP09496 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.35■□□□□ 0.69
CLTAP09496 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.35■□□□□ 0.69
CLTAP09496 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLTAP09496 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 AC100803.2-201ENST00000562459 1963 ntBASIC19.35■□□□□ 0.69
CLTAP09496 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 INTS4P1-201ENST00000438455 1935 ntBASIC19.35■□□□□ 0.69
CLTAP09496 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.35■□□□□ 0.69
CLTAP09496 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLTAP09496 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.34■□□□□ 0.69
CLTAP09496 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLTAP09496 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 AC008764.6-201ENST00000595909 2069 ntBASIC19.34■□□□□ 0.69
CLTAP09496 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLTAP09496 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms