Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 HLA-A-201ENST00000376802 1334 ntBASIC19.86■□□□□ 0.77
CYP3A4P08684 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 AL355312.1-201ENST00000407115 2176 ntBASIC19.86■□□□□ 0.77
CYP3A4P08684 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.86■□□□□ 0.77
CYP3A4P08684 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 HNRNPDP1-201ENST00000439535 754 ntBASIC19.86■□□□□ 0.77
CYP3A4P08684 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CYP3A4P08684 AL139327.4-201ENST00000612362 153 ntBASIC19.86■□□□□ 0.77
CYP3A4P08684 AL773604.1-201ENST00000617417 272 ntBASIC19.86■□□□□ 0.77
CYP3A4P08684 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.86■□□□□ 0.77
CYP3A4P08684 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.86■□□□□ 0.77
CYP3A4P08684 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.86■□□□□ 0.77
CYP3A4P08684 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.86■□□□□ 0.77
CYP3A4P08684 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CYP3A4P08684 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP3A4P08684 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CYP3A4P08684 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP3A4P08684 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP3A4P08684 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CYP3A4P08684 AC007613.1-201ENST00000572811 2597 ntBASIC19.85■□□□□ 0.77
CYP3A4P08684 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.85■□□□□ 0.77
CYP3A4P08684 SIGLEC30P-201ENST00000455569 941 ntBASIC19.85■□□□□ 0.77
CYP3A4P08684 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP3A4P08684 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP3A4P08684 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP3A4P08684 AC004817.3-201ENST00000602957 2129 ntBASIC19.85■□□□□ 0.77
CYP3A4P08684 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP3A4P08684 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CYP3A4P08684 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CYP3A4P08684 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.84■□□□□ 0.77
CYP3A4P08684 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.84■□□□□ 0.77
CYP3A4P08684 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.84■□□□□ 0.77
CYP3A4P08684 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.84■□□□□ 0.77
CYP3A4P08684 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.84■□□□□ 0.77
CYP3A4P08684 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CYP3A4P08684 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CYP3A4P08684 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.84■□□□□ 0.77
CYP3A4P08684 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP3A4P08684 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CYP3A4P08684 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP3A4P08684 AC134043.2-201ENST00000624206 2238 ntBASIC19.83■□□□□ 0.77
CYP3A4P08684 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.83■□□□□ 0.77
CYP3A4P08684 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CYP3A4P08684 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.83■□□□□ 0.77
CYP3A4P08684 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CYP3A4P08684 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP3A4P08684 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP3A4P08684 AL031284.1-201ENST00000419297 478 ntBASIC19.83■□□□□ 0.77
CYP3A4P08684 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
CYP3A4P08684 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CYP3A4P08684 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.83■□□□□ 0.77
CYP3A4P08684 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.83■□□□□ 0.77
CYP3A4P08684 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CYP3A4P08684 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CYP3A4P08684 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CYP3A4P08684 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CYP3A4P08684 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.83■□□□□ 0.76
CYP3A4P08684 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms