Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COL1A2P08123 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL1A2P08123 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.33■□□□□ 0.68
COL1A2P08123 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 ACTG1P4-201ENST00000425123 1122 ntBASIC19.32■□□□□ 0.68
COL1A2P08123 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.32■□□□□ 0.68
COL1A2P08123 RPS15P9-201ENST00000494093 319 ntBASIC19.32■□□□□ 0.68
COL1A2P08123 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.32■□□□□ 0.68
COL1A2P08123 LINC01451-201ENST00000623792 534 ntBASIC19.32■□□□□ 0.68
COL1A2P08123 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 AC097637.2-201ENST00000624096 1997 ntBASIC19.32■□□□□ 0.68
COL1A2P08123 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 REXO1L11P-201ENST00000620964 1927 ntBASIC19.32■□□□□ 0.68
COL1A2P08123 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.32■□□□□ 0.68
COL1A2P08123 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.32■□□□□ 0.68
COL1A2P08123 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
COL1A2P08123 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL1A2P08123 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.32■□□□□ 0.68
COL1A2P08123 IGHV3-65-201ENST00000523210 341 ntBASIC19.32■□□□□ 0.68
COL1A2P08123 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
COL1A2P08123 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.32■□□□□ 0.68
COL1A2P08123 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.32■□□□□ 0.68
COL1A2P08123 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 AC040169.1-201ENST00000565382 521 ntBASIC19.32■□□□□ 0.68
COL1A2P08123 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.32■□□□□ 0.68
COL1A2P08123 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.32■□□□□ 0.68
COL1A2P08123 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL1A2P08123 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL1A2P08123 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL1A2P08123 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL1A2P08123 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.31■□□□□ 0.68
COL1A2P08123 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.31■□□□□ 0.68
COL1A2P08123 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL1A2P08123 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.31■□□□□ 0.68
COL1A2P08123 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL1A2P08123 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL1A2P08123 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.31■□□□□ 0.68
COL1A2P08123 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COL1A2P08123 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COL1A2P08123 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.31■□□□□ 0.68
COL1A2P08123 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COL1A2P08123 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.31■□□□□ 0.68
COL1A2P08123 LINC00982-205ENST00000420957 435 ntBASIC19.31■□□□□ 0.68
COL1A2P08123 AC007967.2-201ENST00000432613 625 ntBASIC19.31■□□□□ 0.68
COL1A2P08123 SLC25A6P5-201ENST00000435663 894 ntBASIC19.31■□□□□ 0.68
COL1A2P08123 AC108073.2-201ENST00000464002 357 ntBASIC19.31■□□□□ 0.68
COL1A2P08123 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.31■□□□□ 0.68
COL1A2P08123 AC092865.5-201ENST00000545435 363 ntBASIC19.31■□□□□ 0.68
COL1A2P08123 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.31■□□□□ 0.68
COL1A2P08123 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.31■□□□□ 0.68
COL1A2P08123 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COL1A2P08123 AL354751.1-201ENST00000412768 1863 ntBASIC19.3■□□□□ 0.68
COL1A2P08123 RNF165-205ENST00000588679 2904 ntBASIC19.3■□□□□ 0.68
COL1A2P08123 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.3■□□□□ 0.68
COL1A2P08123 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COL1A2P08123 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.3■□□□□ 0.68
COL1A2P08123 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COL1A2P08123 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.3■□□□□ 0.68
COL1A2P08123 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.3■□□□□ 0.68
COL1A2P08123 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.3■□□□□ 0.68
COL1A2P08123 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.3■□□□□ 0.68
COL1A2P08123 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A2P08123 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms