Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS1P07996 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS1P07996 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.3■□□□□ 0.2
THBS1P07996 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.3■□□□□ 0.2
THBS1P07996 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS1P07996 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS1P07996 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS1P07996 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS1P07996 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
THBS1P07996 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS1P07996 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
THBS1P07996 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS1P07996 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
THBS1P07996 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.29■□□□□ 0.2
THBS1P07996 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
THBS1P07996 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.29■□□□□ 0.2
THBS1P07996 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.29■□□□□ 0.2
THBS1P07996 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.29■□□□□ 0.2
THBS1P07996 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
THBS1P07996 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.29■□□□□ 0.2
THBS1P07996 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.29■□□□□ 0.2
THBS1P07996 AL645929.1-201ENST00000420084 975 ntBASIC16.29■□□□□ 0.2
THBS1P07996 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.29■□□□□ 0.2
THBS1P07996 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.29■□□□□ 0.2
THBS1P07996 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
THBS1P07996 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.29■□□□□ 0.2
THBS1P07996 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.29■□□□□ 0.2
THBS1P07996 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
THBS1P07996 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
THBS1P07996 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.29■□□□□ 0.2
THBS1P07996 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.29■□□□□ 0.2
THBS1P07996 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THBS1P07996 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 AC016396.2-201ENST00000562575 1417 ntBASIC16.28■□□□□ 0.2
THBS1P07996 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
THBS1P07996 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
THBS1P07996 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
THBS1P07996 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 AC002558.1-201ENST00000488906 803 ntBASIC16.28■□□□□ 0.2
THBS1P07996 GUSBP12-201ENST00000513727 720 ntBASIC16.28■□□□□ 0.2
THBS1P07996 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.28■□□□□ 0.2
THBS1P07996 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.28■□□□□ 0.2
THBS1P07996 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.28■□□□□ 0.2
THBS1P07996 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
THBS1P07996 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THBS1P07996 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THBS1P07996 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.27■□□□□ 0.2
THBS1P07996 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 PRORSD1P-202ENST00000563365 2154 ntBASIC16.27■□□□□ 0.2
THBS1P07996 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms