Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGBP05060 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGBP05060 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CHGBP05060 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.24■□□□□ 0.99
CHGBP05060 SART3-203ENST00000546611 1184 ntBASIC21.24■□□□□ 0.99
CHGBP05060 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGBP05060 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CHGBP05060 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 MTDHP3-201ENST00000594186 672 ntBASIC21.24■□□□□ 0.99
CHGBP05060 AC008608.2-201ENST00000606089 416 ntBASIC21.24■□□□□ 0.99
CHGBP05060 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGBP05060 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CHGBP05060 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGBP05060 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.24■□□□□ 0.99
CHGBP05060 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.23■□□□□ 0.99
CHGBP05060 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
CHGBP05060 SLC25A6P5-201ENST00000435663 894 ntBASIC21.23■□□□□ 0.99
CHGBP05060 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.23■□□□□ 0.99
CHGBP05060 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.23■□□□□ 0.99
CHGBP05060 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGBP05060 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.23■□□□□ 0.99
CHGBP05060 AL355877.3-201ENST00000622820 899 ntBASIC21.23■□□□□ 0.99
CHGBP05060 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGBP05060 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 AC106820.2-201ENST00000563775 3264 ntBASIC21.23■□□□□ 0.99
CHGBP05060 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHGBP05060 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGBP05060 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 LINC00896-202ENST00000609602 2128 ntBASIC21.22■□□□□ 0.99
CHGBP05060 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHGBP05060 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CHGBP05060 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.22■□□□□ 0.99
CHGBP05060 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CHGBP05060 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 AL353593.2-201ENST00000602529 1483 ntBASIC21.22■□□□□ 0.99
CHGBP05060 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.22■□□□□ 0.99
CHGBP05060 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.22■□□□□ 0.99
CHGBP05060 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CHGBP05060 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.22■□□□□ 0.99
CHGBP05060 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.22■□□□□ 0.99
CHGBP05060 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.22■□□□□ 0.99
CHGBP05060 AP002469.2-201ENST00000531724 424 ntBASIC21.22■□□□□ 0.99
CHGBP05060 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.22■□□□□ 0.99
CHGBP05060 AL121912.1-201ENST00000603683 238 ntBASIC21.22■□□□□ 0.99
CHGBP05060 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.22■□□□□ 0.99
CHGBP05060 BX276092.7-203ENST00000637198 1536 ntBASIC21.22■□□□□ 0.99
CHGBP05060 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGBP05060 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CHGBP05060 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.21■□□□□ 0.99
CHGBP05060 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.21■□□□□ 0.99
CHGBP05060 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.21■□□□□ 0.99
CHGBP05060 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.21■□□□□ 0.99
CHGBP05060 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.21■□□□□ 0.99
CHGBP05060 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 AC004870.1-201ENST00000315132 882 ntBASIC21.21■□□□□ 0.99
CHGBP05060 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHGBP05060 AC116407.2-201ENST00000613639 860 ntBASIC21.21■□□□□ 0.99
CHGBP05060 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.21■□□□□ 0.99
CHGBP05060 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHGBP05060 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHGBP05060 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.21■□□□□ 0.99
CHGBP05060 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms