Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.17■□□□□ 0.18
P04436 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.17■□□□□ 0.18
P04436 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.17■□□□□ 0.18
P04436 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.17■□□□□ 0.18
P04436 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.17■□□□□ 0.18
P04436 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 BICD1-207ENST00000551848 1962 ntBASIC16.17■□□□□ 0.18
P04436 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
P04436 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
P04436 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.16■□□□□ 0.18
P04436 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 AL356309.3-201ENST00000624132 1934 ntBASIC16.16■□□□□ 0.18
P04436 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P04436 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.16■□□□□ 0.18
P04436 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.16■□□□□ 0.18
P04436 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.16■□□□□ 0.18
P04436 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.16■□□□□ 0.18
P04436 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 AL773604.1-201ENST00000617417 272 ntBASIC16.16■□□□□ 0.18
P04436 TP73-AS1-207ENST00000624167 988 ntBASIC16.16■□□□□ 0.18
P04436 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.16■□□□□ 0.18
P04436 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P04436 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
P04436 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.16■□□□□ 0.18
P04436 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P04436 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.16■□□□□ 0.18
P04436 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04436 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
P04436 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.16■□□□□ 0.18
P04436 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
P04436 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
P04436 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.15■□□□□ 0.18
P04436 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
P04436 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.15■□□□□ 0.18
P04436 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.15■□□□□ 0.18
P04436 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.15■□□□□ 0.18
P04436 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
P04436 KRT18P67-201ENST00000432816 1264 ntBASIC16.15■□□□□ 0.18
P04436 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.15■□□□□ 0.18
P04436 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
P04436 AC079776.4-201ENST00000511039 504 ntBASIC16.15■□□□□ 0.18
P04436 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.15■□□□□ 0.18
P04436 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.15■□□□□ 0.18
P04436 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.15■□□□□ 0.18
P04436 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.15■□□□□ 0.18
P04436 SLC25A6P4-201ENST00000586535 553 ntBASIC16.15■□□□□ 0.18
P04436 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.15■□□□□ 0.18
P04436 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.15■□□□□ 0.18
P04436 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.15■□□□□ 0.18
P04436 AL139288.1-201ENST00000623748 933 ntBASIC16.15■□□□□ 0.18
P04436 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.15■□□□□ 0.18
P04436 AP000867.4-201ENST00000641616 219 ntBASIC16.15■□□□□ 0.18
P04436 SIRPAP1-201ENST00000448467 1770 ntBASIC16.15■□□□□ 0.18
P04436 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04436 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
P04436 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.15■□□□□ 0.18
P04436 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
P04436 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
P04436 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms