Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
IFNB1P01574 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.34■□□□□ 0.53
IFNB1P01574 KRT18P65-201ENST00000439811 1286 ntBASIC18.34■□□□□ 0.53
IFNB1P01574 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.34■□□□□ 0.53
IFNB1P01574 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
IFNB1P01574 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.34■□□□□ 0.53
IFNB1P01574 AC066615.1-201ENST00000640911 628 ntBASIC18.34■□□□□ 0.53
IFNB1P01574 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
IFNB1P01574 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.34■□□□□ 0.53
IFNB1P01574 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 HLA-J-201ENST00000462773 1622 ntBASIC18.34■□□□□ 0.53
IFNB1P01574 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
IFNB1P01574 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNB1P01574 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IFNB1P01574 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFNB1P01574 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFNB1P01574 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.33■□□□□ 0.53
IFNB1P01574 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFNB1P01574 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IFNB1P01574 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFNB1P01574 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
IFNB1P01574 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFNB1P01574 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFNB1P01574 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.33■□□□□ 0.52
IFNB1P01574 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFNB1P01574 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.33■□□□□ 0.52
IFNB1P01574 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IFNB1P01574 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFNB1P01574 COX11P1-201ENST00000489116 835 ntBASIC18.33■□□□□ 0.52
IFNB1P01574 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.33■□□□□ 0.52
IFNB1P01574 AL441883.1-201ENST00000566170 1045 ntBASIC18.33■□□□□ 0.52
IFNB1P01574 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
IFNB1P01574 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
IFNB1P01574 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFNB1P01574 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFNB1P01574 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
IFNB1P01574 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.33■□□□□ 0.52
IFNB1P01574 REXO1L11P-201ENST00000620964 1927 ntBASIC18.33■□□□□ 0.52
IFNB1P01574 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IFNB1P01574 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
IFNB1P01574 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.33■□□□□ 0.52
IFNB1P01574 KRT89P-201ENST00000620027 1478 ntBASIC18.33■□□□□ 0.52
IFNB1P01574 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFNB1P01574 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 AP001094.4-201ENST00000579008 2176 ntBASIC18.32■□□□□ 0.52
IFNB1P01574 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
IFNB1P01574 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 KRT8P47-201ENST00000604727 1398 ntBASIC18.32■□□□□ 0.52
IFNB1P01574 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IFNB1P01574 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.32■□□□□ 0.52
IFNB1P01574 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.32■□□□□ 0.52
IFNB1P01574 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.32■□□□□ 0.52
IFNB1P01574 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.32■□□□□ 0.52
IFNB1P01574 AL031432.5-201ENST00000641059 760 ntBASIC18.32■□□□□ 0.52
IFNB1P01574 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.32■□□□□ 0.52
IFNB1P01574 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IFNB1P01574 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.32■□□□□ 0.52
IFNB1P01574 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.32■□□□□ 0.52
IFNB1P01574 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IFNB1P01574 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNB1P01574 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
IFNB1P01574 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNB1P01574 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms