Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SIX6O95475 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.84□□□□□ -0.03
SIX6O95475 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 DUSP5P2-201ENST00000426873 1033 ntBASIC14.84□□□□□ -0.03
SIX6O95475 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.84□□□□□ -0.03
SIX6O95475 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.84□□□□□ -0.03
SIX6O95475 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SIX6O95475 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SIX6O95475 AC009102.3-201ENST00000623118 1491 ntBASIC14.83□□□□□ -0.03
SIX6O95475 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SIX6O95475 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SIX6O95475 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SIX6O95475 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SIX6O95475 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SIX6O95475 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.83□□□□□ -0.04
SIX6O95475 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SIX6O95475 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.83□□□□□ -0.04
SIX6O95475 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SIX6O95475 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SIX6O95475 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.83□□□□□ -0.04
SIX6O95475 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SIX6O95475 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SIX6O95475 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SIX6O95475 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.83□□□□□ -0.04
SIX6O95475 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.83□□□□□ -0.04
SIX6O95475 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.83□□□□□ -0.04
SIX6O95475 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.83□□□□□ -0.04
SIX6O95475 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.83□□□□□ -0.04
SIX6O95475 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.83□□□□□ -0.04
SIX6O95475 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
SIX6O95475 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SIX6O95475 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.83□□□□□ -0.04
SIX6O95475 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SIX6O95475 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.83□□□□□ -0.04
SIX6O95475 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
SIX6O95475 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SIX6O95475 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.83□□□□□ -0.04
SIX6O95475 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SIX6O95475 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.83□□□□□ -0.04
SIX6O95475 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
SIX6O95475 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.83□□□□□ -0.04
SIX6O95475 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIX6O95475 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SIX6O95475 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms