Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CDKL5O76039 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDKL5O76039 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKL5O76039 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.58■□□□□ 0.89
CDKL5O76039 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKL5O76039 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.58■□□□□ 0.89
CDKL5O76039 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDKL5O76039 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKL5O76039 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.58■□□□□ 0.89
CDKL5O76039 AL138831.2-201ENST00000606564 490 ntBASIC20.58■□□□□ 0.89
CDKL5O76039 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKL5O76039 AP000550.4-202ENST00000639755 178 ntBASIC20.58■□□□□ 0.89
CDKL5O76039 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKL5O76039 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL5O76039 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL5O76039 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL5O76039 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CDKL5O76039 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.58■□□□□ 0.88
CDKL5O76039 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CDKL5O76039 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDKL5O76039 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL5O76039 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL5O76039 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL5O76039 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL5O76039 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL5O76039 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL5O76039 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL5O76039 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDKL5O76039 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL5O76039 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.56■□□□□ 0.88
CDKL5O76039 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDKL5O76039 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDKL5O76039 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CDKL5O76039 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 PKD1P1-201ENST00000458669 6805 ntBASIC20.56■□□□□ 0.88
CDKL5O76039 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDKL5O76039 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.56■□□□□ 0.88
CDKL5O76039 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDKL5O76039 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 AC007967.3-201ENST00000434308 558 ntBASIC20.56■□□□□ 0.88
CDKL5O76039 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.56■□□□□ 0.88
CDKL5O76039 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 AC002558.1-201ENST00000488906 803 ntBASIC20.56■□□□□ 0.88
CDKL5O76039 KRT18P35-201ENST00000510488 1269 ntBASIC20.56■□□□□ 0.88
CDKL5O76039 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKL5O76039 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKL5O76039 AC005336.2-201ENST00000593183 939 ntBASIC20.56■□□□□ 0.88
CDKL5O76039 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKL5O76039 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDKL5O76039 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDKL5O76039 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKL5O76039 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.56■□□□□ 0.88
CDKL5O76039 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKL5O76039 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL5O76039 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms