Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1BO75841 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UPK1BO75841 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
UPK1BO75841 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 AC092364.2-201ENST00000596710 2692 ntBASIC15.42■□□□□ 0.06
UPK1BO75841 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
UPK1BO75841 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1BO75841 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.42■□□□□ 0.06
UPK1BO75841 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.42■□□□□ 0.06
UPK1BO75841 CYP2T1P-201ENST00000432607 1285 ntBASIC15.42■□□□□ 0.06
UPK1BO75841 CNN2P6-201ENST00000439038 900 ntBASIC15.42■□□□□ 0.06
UPK1BO75841 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
UPK1BO75841 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
UPK1BO75841 KRT18P14-201ENST00000534205 1250 ntBASIC15.42■□□□□ 0.06
UPK1BO75841 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1BO75841 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.42■□□□□ 0.06
UPK1BO75841 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1BO75841 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1BO75841 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
UPK1BO75841 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK1BO75841 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1BO75841 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
UPK1BO75841 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1BO75841 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1BO75841 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1BO75841 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
UPK1BO75841 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 PRSS44-201ENST00000515154 1146 ntBASIC15.41■□□□□ 0.06
UPK1BO75841 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.41■□□□□ 0.06
UPK1BO75841 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.41■□□□□ 0.06
UPK1BO75841 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.41■□□□□ 0.06
UPK1BO75841 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1BO75841 KRT18P61-201ENST00000585825 1298 ntBASIC15.41■□□□□ 0.06
UPK1BO75841 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.41■□□□□ 0.06
UPK1BO75841 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK1BO75841 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
UPK1BO75841 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1BO75841 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
UPK1BO75841 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
UPK1BO75841 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1BO75841 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UPK1BO75841 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1BO75841 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
UPK1BO75841 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
UPK1BO75841 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms