Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNOT3O75175 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.21■□□□□ 0.35
CNOT3O75175 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 MIR149-201ENST00000384879 89 ntBASIC17.21■□□□□ 0.35
CNOT3O75175 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.21■□□□□ 0.35
CNOT3O75175 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.21■□□□□ 0.35
CNOT3O75175 UNC93B7-201ENST00000509439 705 ntBASIC17.21■□□□□ 0.35
CNOT3O75175 AP000867.3-201ENST00000524675 377 ntBASIC17.21■□□□□ 0.35
CNOT3O75175 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.21■□□□□ 0.35
CNOT3O75175 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.21■□□□□ 0.35
CNOT3O75175 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.21■□□□□ 0.35
CNOT3O75175 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNOT3O75175 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNOT3O75175 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CNOT3O75175 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CNOT3O75175 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CNOT3O75175 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNOT3O75175 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.2■□□□□ 0.34
CNOT3O75175 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.2■□□□□ 0.34
CNOT3O75175 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 KRT89P-201ENST00000620027 1478 ntBASIC17.2■□□□□ 0.34
CNOT3O75175 SDHAP2-201ENST00000455183 2001 ntBASIC17.2■□□□□ 0.34
CNOT3O75175 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CNOT3O75175 AL353692.3-201ENST00000407031 1396 ntBASIC17.2■□□□□ 0.34
CNOT3O75175 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CNOT3O75175 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.2■□□□□ 0.34
CNOT3O75175 RN7SL606P-201ENST00000472779 293 ntBASIC17.2■□□□□ 0.34
CNOT3O75175 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.2■□□□□ 0.34
CNOT3O75175 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.2■□□□□ 0.34
CNOT3O75175 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.2■□□□□ 0.34
CNOT3O75175 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.2■□□□□ 0.34
CNOT3O75175 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.2■□□□□ 0.34
CNOT3O75175 IGHV3-41-201ENST00000613121 348 ntBASIC17.2■□□□□ 0.34
CNOT3O75175 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.2■□□□□ 0.34
CNOT3O75175 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT3O75175 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNOT3O75175 MYLKP1-201ENST00000509077 1580 ntBASIC17.19■□□□□ 0.34
CNOT3O75175 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CNOT3O75175 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT3O75175 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CNOT3O75175 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT3O75175 AC090616.6-201ENST00000582640 721 ntBASIC17.19■□□□□ 0.34
CNOT3O75175 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.19■□□□□ 0.34
CNOT3O75175 AL592071.1-201ENST00000611956 408 ntBASIC17.19■□□□□ 0.34
CNOT3O75175 AC004263.2-201ENST00000617183 678 ntBASIC17.19■□□□□ 0.34
CNOT3O75175 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CNOT3O75175 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT3O75175 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT3O75175 AL513477.1-201ENST00000602865 2407 ntBASIC17.19■□□□□ 0.34
CNOT3O75175 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT3O75175 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms