Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF4O60810 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF4O60810 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF4O60810 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 TPSP2-201ENST00000561760 610 ntBASIC17.02■□□□□ 0.32
PRAMEF4O60810 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 AC011840.4-201ENST00000578471 627 ntBASIC17.02■□□□□ 0.32
PRAMEF4O60810 AC019129.2-201ENST00000609837 1235 ntBASIC17.02■□□□□ 0.32
PRAMEF4O60810 AP000550.4-202ENST00000639755 178 ntBASIC17.02■□□□□ 0.32
PRAMEF4O60810 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF4O60810 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF4O60810 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 NPAP1P7-201ENST00000613027 823 ntBASIC17.01■□□□□ 0.31
PRAMEF4O60810 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.01■□□□□ 0.31
PRAMEF4O60810 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 HCG11-201ENST00000411553 5696 ntBASIC17.01■□□□□ 0.31
PRAMEF4O60810 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEF4O60810 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF4O60810 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PRAMEF4O60810 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17■□□□□ 0.31
PRAMEF4O60810 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 PC-208ENST00000529047 1607 ntTSL 3 BASIC17■□□□□ 0.31
PRAMEF4O60810 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17■□□□□ 0.31
PRAMEF4O60810 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PRAMEF4O60810 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17■□□□□ 0.31
PRAMEF4O60810 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 MIR1224-201ENST00000408193 85 ntBASIC17■□□□□ 0.31
PRAMEF4O60810 AC246785.2-201ENST00000432512 513 ntBASIC17■□□□□ 0.31
PRAMEF4O60810 DRAXINP1-201ENST00000437611 948 ntBASIC17■□□□□ 0.31
PRAMEF4O60810 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17■□□□□ 0.31
PRAMEF4O60810 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17■□□□□ 0.31
PRAMEF4O60810 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17■□□□□ 0.31
PRAMEF4O60810 AP002414.4-201ENST00000589764 1148 ntBASIC17■□□□□ 0.31
PRAMEF4O60810 DBP-204ENST00000599385 709 ntTSL 3 BASIC17■□□□□ 0.31
PRAMEF4O60810 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17■□□□□ 0.31
PRAMEF4O60810 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
PRAMEF4O60810 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PRAMEF4O60810 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PRAMEF4O60810 AC233702.3-201ENST00000578656 1387 ntBASIC17■□□□□ 0.31
PRAMEF4O60810 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PRAMEF4O60810 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
PRAMEF4O60810 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 KRT18P1-202ENST00000452408 1331 ntBASIC16.99■□□□□ 0.31
PRAMEF4O60810 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms