Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.58■□□□□ 0.25
HCN1O60741 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HCN1O60741 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.58■□□□□ 0.24
HCN1O60741 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 AL450487.1-201ENST00000426799 995 ntBASIC16.58■□□□□ 0.24
HCN1O60741 AP002383.4-201ENST00000442518 975 ntBASIC16.58■□□□□ 0.24
HCN1O60741 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.58■□□□□ 0.24
HCN1O60741 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.58■□□□□ 0.24
HCN1O60741 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HCN1O60741 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.58■□□□□ 0.24
HCN1O60741 MIR3180-1-201ENST00000580374 94 ntBASIC16.58■□□□□ 0.24
HCN1O60741 MIR3180-3-201ENST00000584616 94 ntBASIC16.58■□□□□ 0.24
HCN1O60741 AP002414.4-201ENST00000589764 1148 ntBASIC16.58■□□□□ 0.24
HCN1O60741 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.58■□□□□ 0.24
HCN1O60741 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.58■□□□□ 0.24
HCN1O60741 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.58■□□□□ 0.24
HCN1O60741 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.58■□□□□ 0.24
HCN1O60741 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HCN1O60741 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.58■□□□□ 0.24
HCN1O60741 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCN1O60741 AC106820.2-201ENST00000563775 3264 ntBASIC16.57■□□□□ 0.24
HCN1O60741 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HCN1O60741 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.57■□□□□ 0.24
HCN1O60741 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.57■□□□□ 0.24
HCN1O60741 SDHAP2-201ENST00000455183 2001 ntBASIC16.57■□□□□ 0.24
HCN1O60741 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.57■□□□□ 0.24
HCN1O60741 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
HCN1O60741 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.57■□□□□ 0.24
HCN1O60741 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 KRT18P1-202ENST00000452408 1331 ntBASIC16.57■□□□□ 0.24
HCN1O60741 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 IGHGP-201ENST00000390555 1178 ntBASIC16.57■□□□□ 0.24
HCN1O60741 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.57■□□□□ 0.24
HCN1O60741 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.57■□□□□ 0.24
HCN1O60741 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.57■□□□□ 0.24
HCN1O60741 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.57■□□□□ 0.24
HCN1O60741 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.57■□□□□ 0.24
HCN1O60741 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.57■□□□□ 0.24
HCN1O60741 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCN1O60741 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.56■□□□□ 0.24
HCN1O60741 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
HCN1O60741 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HCN1O60741 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.56■□□□□ 0.24
HCN1O60741 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.56■□□□□ 0.24
HCN1O60741 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HCN1O60741 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.56■□□□□ 0.24
HCN1O60741 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.56■□□□□ 0.24
HCN1O60741 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HCN1O60741 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.56■□□□□ 0.24
HCN1O60741 DRAXINP1-201ENST00000437611 948 ntBASIC16.56■□□□□ 0.24
HCN1O60741 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.56■□□□□ 0.24
HCN1O60741 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.56■□□□□ 0.24
HCN1O60741 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HCN1O60741 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.56■□□□□ 0.24
HCN1O60741 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HCN1O60741 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms