Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.26■□□□□ 0.19
LAMA5O15230 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.26■□□□□ 0.19
LAMA5O15230 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LAMA5O15230 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LAMA5O15230 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LAMA5O15230 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LAMA5O15230 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LAMA5O15230 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LAMA5O15230 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMA5O15230 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.26■□□□□ 0.19
LAMA5O15230 ACA64.2-201ENST00000459014 129 ntBASIC16.26■□□□□ 0.19
LAMA5O15230 SLC25A39P2-201ENST00000537614 270 ntBASIC16.26■□□□□ 0.19
LAMA5O15230 MIR4525-201ENST00000580000 75 ntBASIC16.26■□□□□ 0.19
LAMA5O15230 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.26■□□□□ 0.19
LAMA5O15230 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMA5O15230 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.26■□□□□ 0.19
LAMA5O15230 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMA5O15230 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.26■□□□□ 0.19
LAMA5O15230 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMA5O15230 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LAMA5O15230 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMA5O15230 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.25■□□□□ 0.19
LAMA5O15230 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.25■□□□□ 0.19
LAMA5O15230 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.25■□□□□ 0.19
LAMA5O15230 RPS15P9-201ENST00000494093 319 ntBASIC16.25■□□□□ 0.19
LAMA5O15230 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.25■□□□□ 0.19
LAMA5O15230 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.25■□□□□ 0.19
LAMA5O15230 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.25■□□□□ 0.19
LAMA5O15230 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
LAMA5O15230 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LAMA5O15230 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LAMA5O15230 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
LAMA5O15230 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LAMA5O15230 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.25■□□□□ 0.19
LAMA5O15230 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.25■□□□□ 0.19
LAMA5O15230 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.25■□□□□ 0.19
LAMA5O15230 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LAMA5O15230 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LAMA5O15230 MYLKP1-201ENST00000509077 1580 ntBASIC16.25■□□□□ 0.19
LAMA5O15230 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 AC092580.3-201ENST00000430932 139 ntBASIC16.25■□□□□ 0.19
LAMA5O15230 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.25■□□□□ 0.19
LAMA5O15230 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.25■□□□□ 0.19
LAMA5O15230 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LAMA5O15230 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.24■□□□□ 0.19
LAMA5O15230 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.24■□□□□ 0.19
LAMA5O15230 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LAMA5O15230 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.24■□□□□ 0.19
LAMA5O15230 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LAMA5O15230 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.24■□□□□ 0.19
LAMA5O15230 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LAMA5O15230 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LAMA5O15230 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
LAMA5O15230 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.24■□□□□ 0.19
LAMA5O15230 IGHV3-71-201ENST00000523324 359 ntBASIC16.24■□□□□ 0.19
LAMA5O15230 LINC01225-203ENST00000563550 1244 ntBASIC16.24■□□□□ 0.19
LAMA5O15230 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.24■□□□□ 0.19
LAMA5O15230 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.24■□□□□ 0.19
LAMA5O15230 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LAMA5O15230 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LAMA5O15230 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LAMA5O15230 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.24■□□□□ 0.19
LAMA5O15230 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms