Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFRD1O00458 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFRD1O00458 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.52■□□□□ 0.4
IFRD1O00458 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFRD1O00458 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
IFRD1O00458 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IFRD1O00458 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IFRD1O00458 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
IFRD1O00458 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.52■□□□□ 0.39
IFRD1O00458 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
IFRD1O00458 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFRD1O00458 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFRD1O00458 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IFRD1O00458 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFRD1O00458 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.51■□□□□ 0.39
IFRD1O00458 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
IFRD1O00458 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IFRD1O00458 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.51■□□□□ 0.39
IFRD1O00458 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.51■□□□□ 0.39
IFRD1O00458 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.51■□□□□ 0.39
IFRD1O00458 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.51■□□□□ 0.39
IFRD1O00458 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IFRD1O00458 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
IFRD1O00458 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.51■□□□□ 0.39
IFRD1O00458 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFRD1O00458 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IFRD1O00458 PRORSD1P-202ENST00000563365 2154 ntBASIC17.5■□□□□ 0.39
IFRD1O00458 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.5■□□□□ 0.39
IFRD1O00458 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IFRD1O00458 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.5■□□□□ 0.39
IFRD1O00458 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
IFRD1O00458 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.5■□□□□ 0.39
IFRD1O00458 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.5■□□□□ 0.39
IFRD1O00458 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 KRT18P56-201ENST00000507275 550 ntBASIC17.5■□□□□ 0.39
IFRD1O00458 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
IFRD1O00458 AC012615.1-201ENST00000565797 1299 ntBASIC17.5■□□□□ 0.39
IFRD1O00458 MIR3652-201ENST00000579335 131 ntBASIC17.5■□□□□ 0.39
IFRD1O00458 AC116407.2-201ENST00000613639 860 ntBASIC17.5■□□□□ 0.39
IFRD1O00458 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.5■□□□□ 0.39
IFRD1O00458 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.5■□□□□ 0.39
IFRD1O00458 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
IFRD1O00458 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
IFRD1O00458 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.5■□□□□ 0.39
IFRD1O00458 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFRD1O00458 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
IFRD1O00458 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
IFRD1O00458 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFRD1O00458 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
IFRD1O00458 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.49■□□□□ 0.39
IFRD1O00458 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.49■□□□□ 0.39
IFRD1O00458 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.49■□□□□ 0.39
IFRD1O00458 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
IFRD1O00458 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
IFRD1O00458 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFRD1O00458 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.49■□□□□ 0.39
IFRD1O00458 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.49■□□□□ 0.39
IFRD1O00458 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFRD1O00458 KRT17P6-201ENST00000453795 1220 ntBASIC17.49■□□□□ 0.39
IFRD1O00458 MINOS1P3-201ENST00000457048 203 ntBASIC17.49■□□□□ 0.39
IFRD1O00458 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFRD1O00458 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.49■□□□□ 0.39
IFRD1O00458 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.49■□□□□ 0.39
IFRD1O00458 AC074051.2-201ENST00000565115 352 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms