Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.9■□□□□ 0.3
RTCAO00442 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.9■□□□□ 0.3
RTCAO00442 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.9■□□□□ 0.3
RTCAO00442 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.9■□□□□ 0.3
RTCAO00442 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.9■□□□□ 0.3
RTCAO00442 DDX43P3-201ENST00000441064 443 ntBASIC16.9■□□□□ 0.3
RTCAO00442 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 AP005901.3-202ENST00000581653 237 ntBASIC16.9■□□□□ 0.3
RTCAO00442 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RTCAO00442 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 AL353801.3-201ENST00000609898 542 ntBASIC16.9■□□□□ 0.3
RTCAO00442 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.9■□□□□ 0.3
RTCAO00442 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.9■□□□□ 0.3
RTCAO00442 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
RTCAO00442 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RTCAO00442 LINC00304-203ENST00000565008 1864 ntBASIC16.9■□□□□ 0.3
RTCAO00442 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.9■□□□□ 0.3
RTCAO00442 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RTCAO00442 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.9■□□□□ 0.3
RTCAO00442 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RTCAO00442 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
RTCAO00442 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RTCAO00442 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.89■□□□□ 0.3
RTCAO00442 AC010460.3-201ENST00000511359 1579 ntBASIC16.89■□□□□ 0.3
RTCAO00442 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
RTCAO00442 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.89■□□□□ 0.29
RTCAO00442 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
RTCAO00442 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RTCAO00442 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.89■□□□□ 0.29
RTCAO00442 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.89■□□□□ 0.29
RTCAO00442 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.89■□□□□ 0.29
RTCAO00442 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.89■□□□□ 0.29
RTCAO00442 AC091076.1-201ENST00000610741 619 ntBASIC16.89■□□□□ 0.29
RTCAO00442 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.89■□□□□ 0.29
RTCAO00442 AC093458.2-201ENST00000623150 629 ntBASIC16.89■□□□□ 0.29
RTCAO00442 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.89■□□□□ 0.29
RTCAO00442 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RTCAO00442 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
RTCAO00442 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.89■□□□□ 0.29
RTCAO00442 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RTCAO00442 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RTCAO00442 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.89■□□□□ 0.29
RTCAO00442 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTCAO00442 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.88■□□□□ 0.29
RTCAO00442 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.88■□□□□ 0.29
RTCAO00442 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RTCAO00442 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.88■□□□□ 0.29
RTCAO00442 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RTCAO00442 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.88■□□□□ 0.29
RTCAO00442 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RTCAO00442 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTCAO00442 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.88■□□□□ 0.29
RTCAO00442 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RTCAO00442 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RTCAO00442 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.88■□□□□ 0.29
RTCAO00442 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.88■□□□□ 0.29
RTCAO00442 TPSP2-201ENST00000561760 610 ntBASIC16.88■□□□□ 0.29
RTCAO00442 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.88■□□□□ 0.29
RTCAO00442 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.88■□□□□ 0.29
RTCAO00442 AC069148.1-201ENST00000608741 768 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms