Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC28A1O00337 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SLC28A1O00337 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 IGHGP-201ENST00000390555 1178 ntBASIC17.06■□□□□ 0.32
SLC28A1O00337 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC28A1O00337 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 AL137013.1-201ENST00000432946 1228 ntBASIC17.06■□□□□ 0.32
SLC28A1O00337 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC28A1O00337 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SLC28A1O00337 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC28A1O00337 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC28A1O00337 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SLC28A1O00337 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC28A1O00337 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC28A1O00337 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC28A1O00337 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A1O00337 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 AC016396.2-201ENST00000562575 1417 ntBASIC17.05■□□□□ 0.32
SLC28A1O00337 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC28A1O00337 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC28A1O00337 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A1O00337 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC28A1O00337 AC113347.1-201ENST00000413321 391 ntBASIC17.05■□□□□ 0.32
SLC28A1O00337 AC005104.2-201ENST00000427818 678 ntBASIC17.05■□□□□ 0.32
SLC28A1O00337 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.05■□□□□ 0.32
SLC28A1O00337 YBX1P2-201ENST00000489612 999 ntBASIC17.05■□□□□ 0.32
SLC28A1O00337 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC28A1O00337 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC28A1O00337 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A1O00337 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC28A1O00337 AC139887.4-201ENST00000607877 719 ntBASIC17.05■□□□□ 0.32
SLC28A1O00337 AC066615.1-201ENST00000640911 628 ntBASIC17.05■□□□□ 0.32
SLC28A1O00337 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC28A1O00337 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC28A1O00337 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC28A1O00337 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A1O00337 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC28A1O00337 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.05■□□□□ 0.32
SLC28A1O00337 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A1O00337 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A1O00337 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 AL353692.3-201ENST00000407031 1396 ntBASIC17.04■□□□□ 0.32
SLC28A1O00337 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC28A1O00337 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SLC28A1O00337 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 AL121761.2-201ENST00000598007 1648 ntBASIC17.04■□□□□ 0.32
SLC28A1O00337 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC28A1O00337 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC28A1O00337 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
SLC28A1O00337 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SLC28A1O00337 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC28A1O00337 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC28A1O00337 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC28A1O00337 AC092597.1-201ENST00000487352 616 ntBASIC17.04■□□□□ 0.32
SLC28A1O00337 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC28A1O00337 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC28A1O00337 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.04■□□□□ 0.32
SLC28A1O00337 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC28A1O00337 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC28A1O00337 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC28A1O00337 AC133561.5-201ENST00000635547 218 ntBASIC17.04■□□□□ 0.32
SLC28A1O00337 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC28A1O00337 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A1O00337 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms