Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 AL138831.2-201ENST00000606564 490 ntBASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA2E9PIF3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AC125634.1-201ENST00000438758 1403 ntBASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AL590627.1-203ENST00000421194 1026 ntBASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AF186996.4-201ENST00000467186 377 ntBASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AC112698.1-201ENST00000510299 916 ntBASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AP001005.1-201ENST00000571755 1248 ntBASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 MTDHP3-201ENST00000594186 672 ntBASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AC120114.3-201ENST00000611923 658 ntBASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AL773604.1-201ENST00000617417 272 ntBASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
NPIPA2E9PIF3 CROCCP1-201ENST00000426910 5675 ntBASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 AC138028.4-201ENST00000564984 1845 ntBASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms