Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 KRT18P14-201ENST00000534205 1250 ntBASIC17.38■□□□□ 0.37
VGLL3A8MV65 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 AC009237.3-201ENST00000393279 1427 ntBASIC17.38■□□□□ 0.37
VGLL3A8MV65 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VGLL3A8MV65 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VGLL3A8MV65 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VGLL3A8MV65 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VGLL3A8MV65 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms