Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 FAM201B-201ENST00000458407 597 ntBASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 BX088651.1-201ENST00000540551 451 ntBASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 AL049637.2-201ENST00000641778 930 ntBASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 AC092338.2-201ENST00000568827 1415 ntBASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 PKD1P5-201ENST00000532415 10291 ntBASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV5A0A0B4J249 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.77□□□□□ -0.2
TRAV5A0A0B4J249 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV5A0A0B4J249 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV5A0A0B4J249 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV5A0A0B4J249 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV5A0A0B4J249 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
TRAV5A0A0B4J249 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 KRT18P29-201ENST00000397031 1267 ntBASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 AC142381.4-202ENST00000563973 229 ntBASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 AC024243.1-201ENST00000609234 778 ntBASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 LINC01451-201ENST00000623792 534 ntBASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
TRAV5A0A0B4J249 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms