Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 MRPL20P1-201ENST00000400819 433 ntBASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 AL078644.1-201ENST00000609881 752 ntBASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 AC116407.2-201ENST00000613639 860 ntBASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 AC010654.1-201ENST00000615722 808 ntBASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 AL513190.1-201ENST00000621254 727 ntBASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 AL805961.1-202ENST00000641562 540 ntBASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC187A0A096LP49 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC187A0A096LP49 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.71■□□□□ 0.26
CCDC187A0A096LP49 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC187A0A096LP49 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 AL031598.1-201ENST00000561511 1773 ntBASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 GPR89P-201ENST00000407924 1495 ntBASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 CYMP-203ENST00000474680 1263 ntBASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 RFPL4AP1-201ENST00000530883 850 ntBASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 ELL2P1-201ENST00000413990 1906 ntBASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC187A0A096LP49 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 CEND1P1-201ENST00000451006 455 ntBASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 AC109462.3-201ENST00000573934 613 ntBASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms