Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CYP46A1Q9Y6A2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 AL645929.1-201ENST00000420084 975 ntBASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.02■□□□□ 0.96
CYP46A1Q9Y6A2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CYP46A1Q9Y6A2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 AC096633.1-201ENST00000422446 749 ntBASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYP46A1Q9Y6A2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 AC106820.2-201ENST00000563775 3264 ntBASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CYP46A1Q9Y6A2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms