Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 MIR662-201ENST00000384847 95 ntBASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 AC079781.3-201ENST00000449110 356 ntBASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 HMGB3P14-201ENST00000494195 599 ntBASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 AC009113.1-201ENST00000570267 2443 ntBASIC17.56■□□□□ 0.4
PCDHGA4Q9Y5G9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 AC012615.1-201ENST00000565797 1299 ntBASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 AL391807.1-203ENST00000604392 2365 ntBASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA4Q9Y5G9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 TOB2P1-201ENST00000469761 992 ntBASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 FOSL1P1-201ENST00000511041 816 ntBASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 AC020763.4-201ENST00000623414 4170 ntBASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 PCDHA12-202ENST00000613593 2588 ntBASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA4Q9Y5G9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms