Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 REXO1L11P-201ENST00000620964 1927 ntBASIC16.78■□□□□ 0.28
AP4S1Q9Y587 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 KSR1P1-201ENST00000446298 240 ntBASIC16.78■□□□□ 0.28
AP4S1Q9Y587 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.78■□□□□ 0.28
AP4S1Q9Y587 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 HOXB1-202ENST00000577092 1414 ntBASIC16.78■□□□□ 0.28
AP4S1Q9Y587 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.77■□□□□ 0.28
AP4S1Q9Y587 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 KRASP1-201ENST00000407852 552 ntBASIC16.77■□□□□ 0.28
AP4S1Q9Y587 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 AC098934.4-201ENST00000564127 592 ntBASIC16.77■□□□□ 0.28
AP4S1Q9Y587 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.77■□□□□ 0.28
AP4S1Q9Y587 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.77■□□□□ 0.28
AP4S1Q9Y587 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.77■□□□□ 0.27
AP4S1Q9Y587 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms