Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 AL163051.1-201ENST00000569214 1512 ntBASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 AL356309.3-201ENST00000624132 1934 ntBASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 AC009947.2-201ENST00000444014 672 ntBASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 AC104390.1-201ENST00000555663 520 ntBASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 AC005363.2-201ENST00000618631 242 ntBASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.01□□□□□ -0.33
HHLA3Q9XRX5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13□□□□□ -0.33
HHLA3Q9XRX5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 ECEL1P3-201ENST00000427961 737 ntBASIC13□□□□□ -0.33
HHLA3Q9XRX5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 SLC25A3P1-201ENST00000443844 931 ntBASIC13□□□□□ -0.33
HHLA3Q9XRX5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 DUT-205ENST00000558813 769 ntTSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 MIR3180-4-201ENST00000582223 153 ntBASIC13□□□□□ -0.33
HHLA3Q9XRX5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 AC140113.3-201ENST00000605663 199 ntBASIC13□□□□□ -0.33
HHLA3Q9XRX5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HHLA3Q9XRX5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HHLA3Q9XRX5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms