Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 AC236430.1-201ENST00000402231 743 ntBASIC16.76■□□□□ 0.27
LHX6Q9UPM6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 AC068587.9-201ENST00000641814 219 ntBASIC16.76■□□□□ 0.27
LHX6Q9UPM6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 FP475955.4-201ENST00000623131 1990 ntBASIC16.75■□□□□ 0.27
LHX6Q9UPM6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 AC116562.4-201ENST00000641316 2276 ntBASIC16.75■□□□□ 0.27
LHX6Q9UPM6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 AC004835.2-201ENST00000603762 682 ntBASIC16.75■□□□□ 0.27
LHX6Q9UPM6 AL606495.2-201ENST00000605867 535 ntBASIC16.75■□□□□ 0.27
LHX6Q9UPM6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX6Q9UPM6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 AC084346.2-201ENST00000607097 949 ntBASIC16.74■□□□□ 0.27
LHX6Q9UPM6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.74■□□□□ 0.27
LHX6Q9UPM6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX6Q9UPM6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms