Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 REXO1L9P-201ENST00000604264 2108 ntBASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 LINC00602-201ENST00000629776 2065 ntBASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 HLA-A-201ENST00000376802 1334 ntBASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.37■□□□□ 0.21
NPIPA1Q9UND3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 FAM197Y8-203ENST00000450145 560 ntBASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 AC132008.2-207ENST00000454517 770 ntBASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 AC120114.3-201ENST00000611923 658 ntBASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 TP73-AS1-207ENST00000624167 988 ntBASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA1Q9UND3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 RCN1P2-201ENST00000398357 915 ntBASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms