Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 PRSS29P-201ENST00000440800 595 ntBASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 AC108751.1-201ENST00000490852 363 ntBASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 RPS15P9-201ENST00000494093 319 ntBASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SYNPO2Q9UMS6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AP002414.1-201ENST00000391405 1147 ntBASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 LINC00982-205ENST00000420957 435 ntBASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 KRT18P3-201ENST00000451602 1288 ntBASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AL139327.4-201ENST00000612362 153 ntBASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AC006538.3-201ENST00000612495 578 ntBASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AC097637.2-201ENST00000624096 1997 ntBASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SYNPO2Q9UMS6 AC006116.8-202ENST00000587620 1550 ntBASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPO2Q9UMS6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 RNA5SP416-201ENST00000516838 111 ntBASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms