Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 KRT18P55-202ENST00000578578 1546 ntBASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND2AQ9ULE3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 AL020989.1-201ENST00000422979 469 ntBASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 PMS2P1-201ENST00000431037 1228 ntBASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 IGHV3-22-201ENST00000520721 359 ntBASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 AC132938.5-201ENST00000624980 1813 ntBASIC21.41■■□□□ 1.02
DENND2AQ9ULE3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 AC004817.3-201ENST00000602957 2129 ntBASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 AC092910.1-201ENST00000482027 1129 ntBASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 AC105339.3-201ENST00000560043 636 ntBASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND2AQ9ULE3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.39■■□□□ 1.02
DENND2AQ9ULE3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
DENND2AQ9ULE3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
DENND2AQ9ULE3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DENND2AQ9ULE3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 AC109462.3-201ENST00000573934 613 ntBASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DENND2AQ9ULE3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms